Pairwise Alignments

Query, 454 a.a., porin from Pseudomonas simiae WCS417

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  294 bits (752), Expect = 4e-84
 Identities = 178/447 (39%), Positives = 245/447 (54%), Gaps = 54/447 (12%)

Query: 13  GAIAQQAG---AAGFVEDSKATLGLRNFYINTDNRNGTGA-NKNEEWGQGFDLRFISGYT 68
           G IA   G   AAGFVED KATLGLRNFYIN +  N +   +K EEW Q F L   SG+T
Sbjct: 15  GVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFT 74

Query: 69  QGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYSSLGL 128
           +G +GFGVD +GL  V+LD GGGT             YG  + P   +G+  +DY  L +
Sbjct: 75  EGPIGFGVDVLGLWSVKLDGGGGT-------------YGTALLPRHDDGRPADDYGRLAV 121

Query: 129 TAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKAKG 188
             KA+IS+TELK+G   P LP++ ++DGR LPQTF+GGQ+T+N+I  LTL GGQ      
Sbjct: 122 AGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSP 181

Query: 189 RNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLT-AQYYYGNLEDFYKQHFLG 247
           RN +S E++S  G          S++F + GG+YK  +D T    +   L+D Y+Q +L 
Sbjct: 182 RNDASMEDMSYGGG--------VSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQ 233

Query: 248 LTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGLFLY 307
           L+H+  +G   L ++L YF+  +DG+                RA  G++DN  YSG+F  
Sbjct: 234 LSHSQPVGDWTLGANLGYFHGDEDGSE---------------RA--GQLDNKTYSGMFSA 276

Query: 308 TVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYDFAK 367
              G TF  G Q  +G +   W+     S   L  D     F  A ER+WQ R+ ++F  
Sbjct: 277 KYGGSTFWVGLQKVDGDT---WMRVNGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVT 333

Query: 368 VGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGPLKNLGVAWKN 427
           VGVPGLT    Y+ G D+ +   T  +       EW R+  +AYVI  G  K+L V W+N
Sbjct: 334 VGVPGLTLMNRYISGRDVHSGGVTDGK-------EWVRETELAYVIQSGAFKDLSVKWRN 386

Query: 428 AMWRTDIAGARDQDENRLIVSYSIPLL 454
           +  R D +   + DENRLI +Y + LL
Sbjct: 387 SSIRRDYSN-NEFDENRLIFNYPLSLL 412