Pairwise Alignments

Query, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  414 bits (1063), Expect = e-120
 Identities = 207/362 (57%), Positives = 272/362 (75%), Gaps = 4/362 (1%)

Query: 6   KTLLALSLMGAM-AGA--AQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNE 62
           K LLA  +   + AGA  AQA+ + L VYNW DYI P T+  F+K+SG+K+VYD+FD+NE
Sbjct: 5   KRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNE 64

Query: 63  TLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPD 122
            LEAKLL G SGYD+VVPSN FLAKQI+AGV+Q LD+SKL N+ +L+ +L+K +  +DP 
Sbjct: 65  ALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPG 124

Query: 123 NKHAFPYMWGSIGIGYNPEKVKAALGVDK-IDSWDVLLKPENIAKLKSCGVSFLDSPTEM 181
           NK A PYM+G++ IG+NP KVKAALG +  +DSWD++ K ENIAKLK CGV+ LDSP+E+
Sbjct: 125 NKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEI 184

Query: 182 LPVALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGD 241
           LP+AL YLGLP ++ K AD K+AE+L LKIRP I YFHSSKY++D+ANG+ICVAVGYSG 
Sbjct: 185 LPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGS 244

Query: 242 IEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAE 301
             QA +RA EA   V V   +PKEGA  +FDM+AIPK A N + A+ F+NYLL+P+V+A 
Sbjct: 245 FSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAP 304

Query: 302 ITNSVHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKIK 361
           I++ V +PN N+ AT  V+  I ++P +YP A+  AKLY +  L    +R  TR+WT+IK
Sbjct: 305 ISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRIK 364

Query: 362 SG 363
           SG
Sbjct: 365 SG 366