Pairwise Alignments

Query, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  299 bits (766), Expect = 7e-86
 Identities = 152/363 (41%), Positives = 230/363 (63%), Gaps = 1/363 (0%)

Query: 1   MKNAGKTLLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDS 60
           +K  G  LLA     A A A       L +YNW+DYI   T+A+FEK +GIKV+YD FD 
Sbjct: 5   LKVIGGLLLASGASLAQA-AEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDG 63

Query: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSD 120
            ET++ KLL G+SGYD+V+ + + +   I AGV+Q LDK +L ++ NL++ ++  +   D
Sbjct: 64  YETVQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYD 123

Query: 121 PDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPTE 180
           P  K++ PY WGS G+ YN +K+ A +    I S  +L  P+ +++   CGV+ +D+PTE
Sbjct: 124 PGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTE 183

Query: 181 MLPVALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSG 240
           ++P+AL YLG    +   ADLK AE L L IRP I  F S  Y++ L NG++C+A+ +SG
Sbjct: 184 VIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSG 243

Query: 241 DIEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMA 300
           D   A++RA EA   +K+++ IP+EG+  +FD + IPKDA +   A++F+ +LL+PQ MA
Sbjct: 244 DYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMA 303

Query: 301 EITNSVHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKI 360
           ++T+ +H+ N N  ATALV  +I  DP IYP A  + +L+A         R +TR W+ +
Sbjct: 304 KVTDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTV 363

Query: 361 KSG 363
           K+G
Sbjct: 364 KTG 366