Pairwise Alignments

Query, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  323 bits (827), Expect = 6e-93
 Identities = 161/357 (45%), Positives = 237/357 (66%), Gaps = 2/357 (0%)

Query: 6   KTLLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETLE 65
           ++L  LSL+ A+    QA++KV+++Y+W+DY+AP T+  FE+E+G KV YD FD+ E LE
Sbjct: 6   RSLCLLSLVLALP--LQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEVLE 63

Query: 66  AKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNKH 125
            KLL G SGYD+VVPS+  LA+ +KA   Q LD   +  Y NL+K LL  ++  DP N+H
Sbjct: 64  TKLLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRH 123

Query: 126 AFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPVA 185
           A PY WG++G+G N E V+  LG   +DS D+L KPE   +LK CG++  DSP E++ VA
Sbjct: 124 AVPYTWGTLGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVA 183

Query: 186 LHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIEQA 245
           L+YLG    +Q K DL  A++L  +++PSI Y  + + I+DLANG++C+A+ Y+GD   A
Sbjct: 184 LNYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMA 243

Query: 246 KSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITNS 305
             +A  AG   +V Y IP+EG   + D + IPKDA + +AA  F+ ++LKP+ +A +TN+
Sbjct: 244 ADQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNT 303

Query: 306 VHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKIKS 362
           + F N N+ AT LVD+ + +DP IYP A+V+ +LYA   +  A  R+  R WT  +S
Sbjct: 304 LFFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRS 360