Pairwise Alignments

Query, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  276 bits (705), Expect = 8e-79
 Identities = 142/361 (39%), Positives = 220/361 (60%), Gaps = 2/361 (0%)

Query: 3   ISLFRKAMLVGAGITLTLSVQAAP-TVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSN 61
           +S  R+++ +   + L L +QA    V++Y+W+DY+   TL  FE+ +G K  YD FD+ 
Sbjct: 1   MSAMRRSLCL-LSLVLALPLQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTP 59

Query: 62  ETLEGKLLAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTNYANLDPALLKRLEKNDP 121
           E LE KLL G +GYDVVVPS+  L + +KA A Q LD   +  Y NLD  LL +L + DP
Sbjct: 60  EVLETKLLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDP 119

Query: 122 GNQYAVPYLWGTNGIGYNGDKGKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSADEM 181
           GN++AVPY WGT G+G N +  ++ LG   +DS  +LF+PE   +L  CG++  DS  E+
Sbjct: 120 GNRHAVPYTWGTLGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEV 179

Query: 182 LPAVLNYMGLNPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGD 241
           +   LNY+G +P S N DD   A+  L +++P ++Y  + + I+DLANG++C+A  ++GD
Sbjct: 180 IGVALNYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGD 239

Query: 242 VFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQ 301
              A  +A  AGK   + Y IP+EG  +W D L IPKDA + + A AFI ++L+PE +A 
Sbjct: 240 AAMAADQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAA 299

Query: 302 VSDYVGYANPNPGADKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVK 361
           +++ + +AN N  A  L+++++R D  +YP   V  R + +  +     R   R WT  +
Sbjct: 300 LTNTLFFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFR 359

Query: 362 T 362
           +
Sbjct: 360 S 360