Pairwise Alignments

Query, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  407 bits (1047), Expect = e-118
 Identities = 194/352 (55%), Positives = 259/352 (73%), Gaps = 2/352 (0%)

Query: 14  AGITLTLSV-QAAPTVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSNETLEGKLLAGR 72
           A + L  SV  AA TV IYNWS Y+  DTL NF++ASGI P YDV+DSNETL+GKL+ G 
Sbjct: 7   APLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGN 66

Query: 73  TGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTNYANLDPALLKRLEKNDPGNQYAVPYLWG 132
           +GYDVV PSNHF+ +QI+  A ++LDKS L N+ NL+P LLK LE NDPGNQY  PYLWG
Sbjct: 67  SGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWG 126

Query: 133 TNGIGYNGDKGKEVLGVDH-IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGL 191
           + GIGYN DK K VLG +  +DSW ++F+PE M KL +CGV+ +D+  E+LP  L+Y+GL
Sbjct: 127 STGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGL 186

Query: 192 NPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAE 251
             +S +P DY+KA++ L+KVRPY++YFHSSKY  DLANG+ICV  GFSGDV QAK RA E
Sbjct: 187 PHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADE 246

Query: 252 AGKGVNIAYTIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDYVGYANP 311
           A  GV + Y+IPKEG  +WFD++A+P DA + K  +A++NYLLQPEV+A +S++V YAN 
Sbjct: 247 ANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANG 306

Query: 312 NPGADKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVKTG 363
           N  AD L++ +++ +  +YP   V+ + +    +P K+ R+ TR WT +K G
Sbjct: 307 NLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358