Pairwise Alignments

Query, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 370 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  409 bits (1052), Expect = e-119
 Identities = 203/359 (56%), Positives = 265/359 (73%), Gaps = 4/359 (1%)

Query: 10  MLVGAGITLTLSVQAAP--TVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSNETLEGK 67
           ++ GA + ++    AA   T+H+YNWSDYI  DT+ANFEK +GIK VYDVFDSNE LEGK
Sbjct: 12  LVAGALMAVSAGTLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGK 71

Query: 68  LLAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTNYANLDPALLKRLEKNDPGNQYAV 127
           L+AG TG+D+VVPS  FL +Q+ AG FQ LDKS L N+ NLDP +LK + K+DP N+YA+
Sbjct: 72  LMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDPDNKYAM 131

Query: 128 PYLWGTNGIGYNGDKGKEVLGVD-HIDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVL 186
           PYLW T GIGYN DK K VLG D  +DSW V+ +PEN++KL +CGVSF+D+ +E+   VL
Sbjct: 132 PYLWATTGIGYNVDKVKAVLGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191

Query: 187 NYMGLNPNSTNPDDYK-KAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQA 245
           NY+G +PNS+  DDY   A + LLK+RP + YFHSS+YI+DLANG+ICVA G++GDV+QA
Sbjct: 192 NYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQA 251

Query: 246 KARAAEAGKGVNIAYTIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDY 305
             RA EA  GVN++Y IPKEG   +FDV A+P DA N  EA+ F+NYL++PEVIA +SD+
Sbjct: 252 ANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAHISDH 311

Query: 306 VGYANPNPGADKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVKTGK 364
           V YAN N  +  L+ + IR + A+YPP  V  + F      PK+ R+ TR+WTKVK+GK
Sbjct: 312 VYYANGNKASVPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWTKVKSGK 370