Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  310 bits (793), Expect = 4e-89
 Identities = 149/287 (51%), Positives = 203/287 (70%), Gaps = 4/287 (1%)

Query: 18  RHAVIGIPFLWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTFVEQKLQLV--LNLGNY 75
           R  V+ +P+ WL LFF  PF I++KIS ++  +++PPYT ++    +  +    L+  NY
Sbjct: 14  RWLVVAVPYFWLLLFFAAPFLIIVKISLSDTAISMPPYTPVFEGFSKLGEFFSQLDFENY 73

Query: 76  AMLGDDELYIAAYLGSLKMAFFSTLLCLLIGYPMAYAIASARKEMQTVLVLLIMMPTWTA 135
             L +D LYI AYL SL++AF ST L LLIGYPMA A+A A   ++  LV+L+++P WT+
Sbjct: 74  LFLTEDPLYIEAYLSSLRIAFISTFLLLLIGYPMALAMARAPSSVRPTLVMLVILPFWTS 133

Query: 136 ILIRVYAWMGILSNNGLLNGFLMSMGLI--NEPLQILNTNIAVYIGVVYSYLPFMILPLY 193
            LIRVYAW+GIL   GLL      +G +  ++ + I  T  A++IG+VYSYLPFM+LPLY
Sbjct: 134 FLIRVYAWIGILKPEGLLTVLFQWLGFLGPDQQVNIFRTETAIFIGIVYSYLPFMVLPLY 193

Query: 194 ANLVKHDQSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGG 253
           + L K D +LLEAA+DLG   + +FWKIT PLS  G++AG M+ FIP+ GEFVIP+LLGG
Sbjct: 194 SALEKLDNTLLEAAADLGCPPWKAFWKITFPLSLPGVVAGAMICFIPITGEFVIPDLLGG 253

Query: 254 PETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPIILFNRSQAK 300
            +TLMIGK LW EFF NRDWP+ASA+AV++L +L+VPI +F   Q K
Sbjct: 254 AQTLMIGKTLWTEFFGNRDWPLASAVAVLLLILLVVPIAIFQNQQKK 300