Pairwise Alignments

Query, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  293 bits (749), Expect = 5e-84
 Identities = 152/316 (48%), Positives = 210/316 (66%), Gaps = 1/316 (0%)

Query: 3   KTVAILIFPGVQSLDVTGPLDVFCEANRFLSPQDHYQLDVIGLGHGSMAASNGLSLQAHR 62
           KTVA+ +FP    LD+ GPL+VF  ANR+L   +HY++  +G   G + ASNG+++Q   
Sbjct: 2   KTVAMALFPDFLLLDMAGPLEVFSIANRYLPAAEHYRILTLGTEPGPLRASNGVAVQTDL 61

Query: 63  HYSEALQAYDLLLVAGGPQLPFEDFGAEFDDWLRSATARAQRFGSICNGAFMLARAGLLD 122
              +A  AYDLLLV GGP   + +       WL++A  RA+RFGSIC GAF+L  AGLLD
Sbjct: 62  LLDQAQDAYDLLLVPGGPGA-YNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGLLD 120

Query: 123 GKTVTTHWNDAADLARLCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYLLAQDHGPEV 182
              VTTHW+    L +  P A V+ DR+Y+QDG L TS GVTAGIDL+L ++AQDHG +V
Sbjct: 121 NHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGKQV 180

Query: 183 ALSVAKRLVVFTQRSGGQSQFSPFLTPHAETTSAVALVQLYVLANLTGDLTIADLAKAAN 242
           A+ VAK L+V  +R GGQ+QFSP     A   +A+  VQ +VL +L    TI  +A  A 
Sbjct: 181 AVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAALAG 240

Query: 243 MSARNFSRVFAREARITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFRDAQHMRSVF 302
           MSAR+F+R+FA+E ++TP  F++ AR+D AR +LE++  PLKTVA+  GF   +HMR +F
Sbjct: 241 MSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRFLF 300

Query: 303 NRRLGVTPQQFRLNFA 318
           + +LG+ P Q+R  F+
Sbjct: 301 SEKLGLNPTQYRQQFS 316