Pairwise Alignments

Query, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  193 bits (490), Expect = 5e-54
 Identities = 115/311 (36%), Positives = 179/311 (57%), Gaps = 9/311 (2%)

Query: 1   MHKTVAILIFPGVQSLDVTGPLDVFCEANRFLSPQDHYQLDVIGLGHGSMAASNGLSLQA 60
           MH +VA++++P  QSL ++  L    E    L  +  Y+  ++    G++  S G S+  
Sbjct: 1   MH-SVALMVYPNFQSLSLS--LGSVFECANLLRGEPAYEFHLVSESGGAVMTSQGFSVNT 57

Query: 61  HRHYSEALQAYDLLLVAGGPQLPFEDFGAEFDDWLRSATARAQRFGSICNGAFMLARAGL 120
                E    YD L+V+G   L F    A   + +++A+A+++R  S+C G F+LA AGL
Sbjct: 58  TPIRPEG---YDTLIVSG--YLEFRLPEANLLELVKAASAQSRRVASLCMGIFVLAEAGL 112

Query: 121 LDGKTVTTHWNDAADLARLCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYLLAQDHGP 180
           L+GK  TTHW  A    +  P  +++ D+L++ DG+++T AG++AG+DL+L ++  D G 
Sbjct: 113 LEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGS 172

Query: 181 EVALSVAKRLVVFTQRSGGQSQFSPFLTPHAETTSAVALVQLYVLANLTGDLTIADLAKA 240
           ++A  +A++LV+  +R   QSQ S  L    + +  V L   Y   NLT DL++  LA  
Sbjct: 173 DLARRIARKLVIAQRRGSEQSQLSALLELDPK-SDRVQLALAYARENLTHDLSVEALADV 231

Query: 241 ANMSARNFSRVFAREARITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFRDAQHMRS 300
           A +S R FSRVF  E   TPA+ +E  RV+AAR M+E+SR P++ VA + GF D + MR 
Sbjct: 232 ARLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQ 291

Query: 301 VFNRRLGVTPQ 311
            F R  G  PQ
Sbjct: 292 AFLRAFGQPPQ 302