Pairwise Alignments

Query, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  211 bits (537), Expect = 2e-59
 Identities = 135/325 (41%), Positives = 180/325 (55%), Gaps = 13/325 (4%)

Query: 1   MHKTVAILIFPGVQSLDVTGPLDVFCEANRFLSPQDH---YQLDVIGLGHGSMAASNGLS 57
           M + V +L F   Q LDVTGPL VF   N     +     Y + VI      +  S GL+
Sbjct: 1   MPRIVHVLAFDNAQVLDVTGPLQVFASTNDLARQRGEPLPYAVSVIAAQSEPVMTSAGLA 60

Query: 58  LQAHRHYSEALQAYDLLLVAGGPQLPFEDFGAEFD----DWLRSATARAQRFGSICNGAF 113
           L A      A    D L++AGG    +  +GA  D    DW+R      +R  S+C GAF
Sbjct: 61  LVAEP-LPAADAPCDTLVIAGG----WGVYGAAEDPALVDWVREKAKHTRRMTSVCTGAF 115

Query: 114 MLARAGLLDGKTVTTHWNDAADLARLCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYL 173
           +LA +G+LDG  V THW    +LAR  P+  V+++ +++Q G ++TSAGVTAGIDL L L
Sbjct: 116 LLAASGMLDGCRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLAL 175

Query: 174 LAQDHGPEVALSVAKRLVVFTQRSGGQSQFSPFLTPHAETTSAVALVQLYVLANLTGDLT 233
           + +D G  +AL VA+ LVVF +R GGQSQFS  L+   +  S  A +  ++  NLT DL 
Sbjct: 176 VEEDLGRAIALEVARHLVVFLKRPGGQSQFSVTLSLQKD-DSRFAELHAWMAENLTLDLN 234

Query: 234 IADLAKAANMSARNFSRVFAREARITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFR 293
           I  LA  A MS R+F R +  E   TPA  VE  RV+ AR  L  S A +K +A QCGF 
Sbjct: 235 IPTLAAQAGMSERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIKRIAVQCGFG 294

Query: 294 DAQHMRSVFNRRLGVTPQQFRLNFA 318
             + +R  F R L VTPQ +R  F+
Sbjct: 295 CEETLRRSFLRALSVTPQAYRERFS 319