Pairwise Alignments

Query, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 323 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  199 bits (507), Expect = 6e-56
 Identities = 129/317 (40%), Positives = 176/317 (55%), Gaps = 7/317 (2%)

Query: 1   MHKTVAILIFPGVQSLDVTGPLDVFCEANRFLSPQ--DHYQLDVIGLGHGSMAASNGLSL 58
           M ++VA L+ P  Q  D+ GPL VF  A      +    Y++ V+    G +A S GL +
Sbjct: 1   MSRSVAFLLVPEFQLFDMAGPLSVFQVAAEIGRGRRGPAYEVAVLSERGGRVACSAGLEM 60

Query: 59  QAHRHYSEALQAYDLLLVAG-GPQLPFEDFGAEFDDWLRSATARAQRFGSICNGAFMLAR 117
             H       QA  +++  G G + P     A     LR A A  +R  S+C GAF+LA 
Sbjct: 61  --HTRAWRDSQAGTVIVPGGVGARKPGAATPALMQH-LRGALAAKRRVASVCTGAFLLAE 117

Query: 118 AGLLDGKTVTTHWNDAADLARLCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYLLAQD 177
           AGLLDG+  TTHW  AA L R  P   VDADR++V+DGN+++SAG+ AGIDL+L ++  D
Sbjct: 118 AGLLDGRHATTHWRQAALLQRNYPAITVDADRIFVRDGNVWSSAGIAAGIDLALAMVEAD 177

Query: 178 HGPEVALSVAKRLVVFTQRSGGQSQFSPFLTPHAETTSAVALVQLYVLANLTGDLTIADL 237
            G + A +VA+ +VV+ +R+GGQSQFS  L   A  +  +  V  Y+  NLT DL I  L
Sbjct: 178 LGADTAGAVAREMVVYHRRTGGQSQFSA-LQDLAPQSGRMRAVLAYIGENLTADLDIERL 236

Query: 238 AKAANMSARNFSRVFAREARITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFRDAQH 297
           A+ A +S R F R F  E   TPA+ VER R + AR  +E   + ++ VA   GF D + 
Sbjct: 237 AEVACVSPRQFMRAFKAETGQTPAKAVERIRAEVARTHIEGGDSSIEAVARLTGFEDTER 296

Query: 298 MRSVFNRRLGVTPQQFR 314
           MR  F R  G  PQ  R
Sbjct: 297 MRRAFVRVYGQPPQALR 313