Pairwise Alignments

Query, 302 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 3e-28
 Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 17/301 (5%)

Query: 4   IDTLIALANLRGSLDLRCQFQGEWALDHPPESLGVAPYHIVLSGTCRAELSGG-QHVTLE 62
           +D L+    L  SL    ++ G W      + +G A +H+V+ G C   + G  Q + LE
Sbjct: 8   VDWLLESLELDASLFHVGRYCGGWHAS--TQGMGRASFHLVVQGHCWLHIDGQPQAICLE 65

Query: 63  EGDILLMPGGATHLLRSQGARIRPVQPKVIEGGVLKVHRLGGDRPDLD---MLCGSFHYN 119
           +GD       A  LLR    R+   Q  V      +      D    D   ++CG FH+ 
Sbjct: 66  KGD-------AVFLLRDLAYRLSSDQDPVDACAQPRQAMQALDSQAADGVGLVCGFFHFQ 118

Query: 120 RQ--SLLLGALPEYLVVSSREWQGDGQLAALIALLRSEADGQQLGARSFIDALSSALFTL 177
               SL++  L +++++ + +  G     AL  L+  E       ++  ++ L+  LF  
Sbjct: 119 SGLCSLIVEGLADWILLRAEDPSGSAA-RALFGLILEECRRDAGPSQMLLERLTHLLFLY 177

Query: 178 ILRTWLARQTPVAGTFALLVDKRLSKAWQAMLADPGHEWTIDSLAAAATMSRATFMRAFV 237
           +LR  +     + G  AL      +   + ++  PG  WT++++AA   +SR+ F + F 
Sbjct: 178 VLRQQVHAGQSLGGLVALARQPAFAGLLEQLIEHPGQTWTMENMAACTGLSRSAFFKRFS 237

Query: 238 KVAGVSPWGLLTQLRMELAFNLLRQSHLSLLDIATQVGYQSQAAFSKKFKETYGEAPGRL 297
           ++AG SP  +L  LRM  A  LL+  H ++  +  QVGYQS AAF++ F +  G  PG  
Sbjct: 238 ELAGQSPGQVLLALRMRHASQLLQAGH-TVEQVGAQVGYQSVAAFTRAFAKAVGVQPGAY 296

Query: 298 R 298
           R
Sbjct: 297 R 297