Pairwise Alignments

Query, 302 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 284 a.a., DNA-binding transcriptional regulator RclR from Escherichia coli ECRC62

 Score =  135 bits (341), Expect = 8e-37
 Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 26/300 (8%)

Query: 1   MNSIDTLIALANLRGSLDLRCQFQGEWALDHPPESLGVAPYHIVLSGTCRAELSGGQHVT 60
           M+++  L+ L   +G++D  C    +W L H    L V  +H +  G  + E+  G+  T
Sbjct: 1   MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT 60

Query: 61  LEEGDILLMPGGATHLLRSQGARIRPVQPKVIEGGVLKVHRLGGDRPDLDMLCGSFHYNR 120
           L  G+++L+P  + H L                           D     ++CG+     
Sbjct: 61  LRPGNVVLLPQNSAHRLSHV------------------------DNESTCIVCGTLRLQH 96

Query: 121 QS-LLLGALPEYLVVSSREWQGD-GQLAALIALLRSEADGQQLGARSFIDALSSALFTLI 178
            +   L +LPE L ++      +   L   I  L+ E+     G  +    + +  FTL 
Sbjct: 97  SARYFLTSLPETLFLAPINHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLA 156

Query: 179 LRTWLARQTPVAGTFALLVDKRLSKAWQAMLADPGHEWTIDSLAAAATMSRATFMRAFVK 238
           +R W+A+        +LL+  RL    Q ML  PGH WT++SLA+ A MSRA+F   F  
Sbjct: 157 VREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFALLFRD 216

Query: 239 VAGVSPWGLLTQLRMELAFNLLRQSHLSLLDIATQVGYQSQAAFSKKFKETYGEAPGRLR 298
           V+G +P  +LT+LR+++A  +  +  L ++ IA  VGY S+++F K F   +G  PG  R
Sbjct: 217 VSGTTPLAVLTKLRLQIAAQMFSREMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYR 276