Pairwise Alignments

Query, 287 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 289 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  114 bits (284), Expect = 3e-30
 Identities = 95/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 1   MLSAELKAFFMVARLGSITQAAKKLGLSQPTVTTQVRNLESQYGVELFYRGGRRLTVSDE 60
           M   +L+ F +VA L   T AA +LG+SQ  V+  ++ LE + GV LF R   ++ +SD 
Sbjct: 1   MTLTQLEIFSLVAELQGFTSAAHRLGISQSAVSHAIKGLEQELGVALFRRHQAQVELSDI 60

Query: 61  GARLLPMVKAL------LQQEADIEFFLRNSGQVQGALRIAATAP----YYILDLVKAFR 110
           GA+LL   +A+      LQQEA         G  +G LRI +  P    Y +  ++  FR
Sbjct: 61  GAQLLGRARAMLGLANTLQQEA-----ADARGMKRGTLRIGSFGPTSSTYLLPKILNRFR 115

Query: 111 ERLPHVEVSVEIGNSQQVLEALDDYRVDLAASSQLLEDPRLIRRVLGTDPLVLAVHRHHP 170
              P +EV V+ G  +QV++ LD+ RVD+     +L+  R     L  D +V  +   H 
Sbjct: 116 VAYPGIEVHVDEGPDRQVIQWLDERRVDI--GFVVLDQERFDTFPLFEDQMVALLPAGHT 173

Query: 171 LAKLDHVPLTALVGHTLLMREAGSTTRRLTEKMLQDAGVSYGPLLEIGSRESIREAVLRN 230
           LA  +HV L  L      + EAGST   L  ++  +A ++           S  E V R 
Sbjct: 174 LAGREHVSLKDLCNDPFALTEAGST--ELVVRLFNEARLTPNVRYRCSQLLSTLETVSRG 231

Query: 231 IGISIIARQEVP--HDPQL--RVLTIENAPQIPEY--LYCLKERKGARLPAAFLGLAQEM 284
             +S++A+  +P  HDP+   RVL    +P++P    L  L  R+ +    AF+ +AQ +
Sbjct: 232 DAVSVVAQASLPAGHDPRYVQRVL----SPRVPRQVGLAVLDRRQSSPATLAFIRIAQGL 287

Query: 285 S 285
           +
Sbjct: 288 A 288