Pairwise Alignments

Query, 270 a.a., 5-hydroxymethyluracil DNA glycosylase from Pseudomonas simiae WCS417

Subject, 263 a.a., Formamidopyrimidine-DNA glycosylase from Enterobacter asburiae PDN3

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 59/274 (21%), Positives = 110/274 (40%), Gaps = 15/274 (5%)

Query: 1   MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60
           MPE PE+      +   ++G+ ++ V        +P  +  + +L GQ +  +E R K L
Sbjct: 1   MPEGPEIRRAADSLEAAIKGKPLTDVW-----FAFPQLKPFESQLVGQTVTHIETRGKAL 55

Query: 61  LINAEVG-TLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQ 119
           L +     TL SH  + G  R+VE          + + L++              ML  +
Sbjct: 56  LTHFSHNLTLYSHNQLYGVWRVVEADEQPQTTRVLRVRLQTADKAILLYSASDIEMLTPE 115

Query: 120 DPHNHELLIRLGPEPLT---DLFDGERLFQLSRGKSMAVKPFIMDNAVVVGVGNIYATEA 176
               H  L R+GP+ L       D +      + ++       +D A + G+GN    E 
Sbjct: 116 QLLTHPFLQRVGPDVLDMRLTASDVKARLLSPKFRNRQFSGLFLDQAFLAGLGNYLRVEI 175

Query: 177 LFAAGIDPRRAAGGISRGRYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELF 236
           L+  G+  +  A  ++  +   L+  +  +   +    G    +   G      F+ ++F
Sbjct: 176 LWEVGLAAQHKASQLNDEQLEALSHALLDIPRLSYNTRGVVDENTHHG----ALFRFKVF 231

Query: 237 VYGRGGEACKVCGSELRNVVLGQRASVFCPKCQR 270
              R G+ C+ CG  +  ++L  R   +CP CQ+
Sbjct: 232 --HRAGKKCERCGGIIDRIMLSSRPFYWCPHCQQ 263