Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 299 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  140 bits (354), Expect = 4e-38
 Identities = 104/317 (32%), Positives = 155/317 (48%), Gaps = 51/317 (16%)

Query: 116 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLP 175
           YL   +IL  I  +  L LN+  GL GL++ G   FY +GAY  AL      L    V P
Sbjct: 4   YLFATLILVAIATIAALALNLQWGLGGLVNFGLFGFYMLGAYVCAL------LDVNGVPP 57

Query: 176 LAAIAAALA-----GCILGFPVLRMHGDYLAIVTLGFGEIIRLVLN--NWLSFTGGPNGM 228
           LAA+AAA+A       ++    +R+  DYLAIVTLGF E +RL ++  +WL  T G  G+
Sbjct: 58  LAAMAAAVAVTAVASALVSLISIRLSEDYLAIVTLGFAECLRLFISYEDWL--TRGTLGV 115

Query: 229 PVPSPTFLGLEFGKRAKDGGI--PFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRL 286
           P                  GI  PF +  G  ++  +   F Y  L    L +     R+
Sbjct: 116 P------------------GIVRPFAQSLGPQWSDAVFLAFAYACLASSFLLL----RRI 153

Query: 287 TRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSF 346
           TR P GR   A R+D     ++G N + ++   F IG +  G+AG   A Y  +++PS F
Sbjct: 154 TRAPFGRLVRATRDDPTVAEALGKNVLALRAKVFAIGGALLGVAGSLHAFYYTYIDPSQF 213

Query: 347 TFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSE------------YRVLLF 394
               +A     V++GG GS +GV++A F + +  E  R  S+             R++L 
Sbjct: 214 GTTLTAYAFMAVIIGGRGSHIGVLVAGFTVILLLEGSRFLSDVIPFLDGGQLAALRLMLV 273

Query: 395 GVLMVVMMIWRPRGLIR 411
           GV ++ ++I+RP GL+R
Sbjct: 274 GVSLIAILIYRPEGLVR 290