Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  310 bits (794), Expect = 6e-89
 Identities = 202/462 (43%), Positives = 260/462 (56%), Gaps = 65/462 (14%)

Query: 15  DTVLAGLISLVVFGPIVGV---------VLDGYSFNLEPARVALLVAIVMVGRFAMSLFL 65
           D +++GL++ ++F P+VG          ++  Y F L    VA+   IVMVGRF + + +
Sbjct: 38  DALVSGLLTALLFLPLVGFRASESSTGSLVLTYRFGL----VAIFAGIVMVGRFLLMVTV 93

Query: 66  QTPKGVKILQGFESTGSGVHVLAPDYKSRLRWIIPALIVIAIVFPIFA---------NKY 116
             P          ST  GV V      S    + P     AI++P  +         ++Y
Sbjct: 94  WNPNRPPRRV---STTPGVMVRLGALASPA--VKPVFFSFAILYPFLSILLAGGLSPSRY 148

Query: 117 LLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLG------- 169
            + + I  L YV+LG GLNIVVGLAGLLDLGYVAFYA+GAY  AL    + +        
Sbjct: 149 WVDLGIYVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTFALLSTSVPINDFFAGTL 208

Query: 170 ---------FWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLS 220
                    FW  LPL+ I AA+ G ILGFPVLR+ GDYLAIVTL FGEIIRLVL NW+S
Sbjct: 209 GDDFWTAWAFWICLPLSGILAAMWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWVS 268

Query: 221 FTGGPNGMP-VPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAV 279
            T G  G+  +P  TF G+ F          F   FG+++N   +  F+Y V+  +    
Sbjct: 269 LTNGGAGISSIPPITFFGVPFDSSETG----FASIFGLEFNSMHRMFFLYFVILGLAALT 324

Query: 280 LYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQG 339
             +  RL +MPVGRAWEALREDEIACRS+G+N  L KL+AF  GA   G AG FFA    
Sbjct: 325 AVVTIRLRKMPVGRAWEALREDEIACRSLGINTTLTKLTAFATGAMFGGFAGAFFAVRIR 384

Query: 340 FVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSF------------- 386
           FV+P SFTF ESA+ILAIVVLGGMGS +GV  AA +L    ELLR+              
Sbjct: 385 FVSPESFTFMESAVILAIVVLGGMGSQMGVAGAAILLIGGMELLRNLSFLKADFLFGSDF 444

Query: 387 --SEYRVLLFGVLMVVMMIWRPRGLI--RISRTGVTPRKGVA 424
             S YR+L+FG  MV +M+WRPRGL+  R+    +  RK V+
Sbjct: 445 DPSLYRMLIFGFAMVAVMVWRPRGLVSSRMPTIFLKERKAVS 486