Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 333 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  166 bits (420), Expect = 1e-45
 Identities = 106/338 (31%), Positives = 171/338 (50%), Gaps = 30/338 (8%)

Query: 80  TGSGVHVLAP----DYKSRLRWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLN 135
           TGS  H   P       +RL  +  AL  +  V P   N Y +++  L LI ++L   LN
Sbjct: 8   TGSMTHSRLPRRGLSRHARLALVWLALAAVPFVVP---NAYWISLANLALINLVLIASLN 64

Query: 136 IVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRM 195
           +++G  G + L +  F+ +GAY   +     GL  W  LP AA+ A L   ++G P LR+
Sbjct: 65  LLMGYGGQISLAHAGFFGLGAYASGILNVRYGLPPWAGLPAAAVVAGLGALLIGIPALRL 124

Query: 196 HGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFF 255
            G YLA+ TLG+  I+ +     +  TGGPNG+       LG+E          PF   F
Sbjct: 125 RGHYLAMATLGWNAILVVFFTQLVGLTGGPNGL-------LGVE----------PF-SIF 166

Query: 256 GIDYNPNIK-FLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVL 314
           G   +   K F   + V FLV+LA+      L    +GR+  A+  +E+  +S+G+    
Sbjct: 167 GHALDTEAKAFPLAWAVAFLVMLAI----SNLLASRIGRSIRAVATNELGAQSLGIGSFR 222

Query: 315 VKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAF 374
            KL+ F + A  AG+AG  +     + +P +F    S ++L +V +GG G+  G ++ A 
Sbjct: 223 TKLAVFVLSAGMAGIAGSLYVHINQYASPETFGIAPSIMLLVMVAIGGAGTFYGPMLGAL 282

Query: 375 VLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLIRI 412
           + T  P++L  + +  ++LFG+ ++V++I  PRGL  I
Sbjct: 283 IYTAVPQILLDYEDAELMLFGLGLLVVLILFPRGLAGI 320