Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 318 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  160 bits (405), Expect = 5e-44
 Identities = 110/319 (34%), Positives = 169/319 (52%), Gaps = 21/319 (6%)

Query: 98  IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157
           ++ A+++IA  F  F + Y   V  L  +  +  +G+ I+ G AG + LG+  F  IG Y
Sbjct: 11  LVLAVLMIASPF-FFPSNYYYRVGSLVFVNAIAVVGIVILTGYAGQISLGHAGFLGIGGY 69

Query: 158 GLALGYQYLGLG-FWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLN 216
             AL   + GL     V+  AA++ A+A  ++G P+L++ G YLA+ TLGFG ++ +VL 
Sbjct: 70  ACALLPAHFGLPPALAVVAGAALSGAIA-YVVGRPILKLKGYYLAVATLGFGVLVSMVLA 128

Query: 217 NWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDY-NPNIKFLFIYIVLFLV 275
           N    TGGP+G+ VP P       G RA        E  GI+  NP   + F  +VLF+ 
Sbjct: 129 NEGWLTGGPDGIKVPDP-------GIRA------LLEQVGIELTNPQFWYAFCGLVLFIG 175

Query: 276 VLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFA 335
               L     L   P GRA  AL   E+A R+ G++    KL+AF I A  A +AG   A
Sbjct: 176 AWLAL----NLRESPTGRALRALHGSEVAARTAGIDVAKAKLNAFVISAVYASVAGSLLA 231

Query: 336 SYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFG 395
                + P    F  S  ++ + VLGG GS +G +  A +LT+ P++L    +Y  ++ G
Sbjct: 232 LQNRLITPDVAGFMHSIELVTMAVLGGAGSVLGGIFGAALLTLLPQVLTVLQDYEHVVLG 291

Query: 396 VLMVVMMIWRPRGLIRISR 414
           ++M+++MI+ P GLI  +R
Sbjct: 292 LVMMLVMIFLPAGLIPSAR 310