Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 306 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  147 bits (371), Expect = 4e-40
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 38/309 (12%)

Query: 116 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTV-L 174
           YL+TV+IL  I  L+GL LN+  GLAGL++ G   F A+GAY LA+   ++G   W   L
Sbjct: 4   YLVTVIILVAIAALVGLALNLQWGLAGLVNFGVAGFVALGAYTLAISAPHVG---WLAGL 60

Query: 175 PLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP-VPSP 233
            LAA   A    +L    +R+  +YLAIVT+GF EI+R++L N    TGG  G+  +P P
Sbjct: 61  ALAAAVCAGLSMLLSLLTIRLEENYLAIVTIGFAEIVRILLLNLGDLTGGALGIADIPRP 120

Query: 234 TFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGR 293
                               F G+        + +   L LVV+ V      L R P GR
Sbjct: 121 --------------------FAGVTPAGWGDAVILAFALGLVVI-VFAFSEALVRSPFGR 159

Query: 294 AWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESAL 353
           A  A+R+D  A  ++G   + +++ AF IG +  GLAG   A +  +++PS FT   +A 
Sbjct: 160 ALRAVRDDATAAAALGKPVLALRVRAFAIGGAIMGLAGALHAFFLTYIDPSQFTPIITAY 219

Query: 354 ILAIVVLGGMGSTVGVVIAAFVLTVAPELLR------------SFSEYRVLLFGVLMVVM 401
               V+ GG GS +G+V+ A  + +  E  R              S  R+ + GV +V++
Sbjct: 220 AFMAVIAGGRGSNLGLVLGAGSIMLILEATRFLKDVIPGIDGVQLSALRLGMIGVGIVLL 279

Query: 402 MIWRPRGLI 410
           +I RP GL+
Sbjct: 280 LILRPEGLV 288