Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 399 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  178 bits (451), Expect = 3e-49
 Identities = 126/398 (31%), Positives = 207/398 (52%), Gaps = 29/398 (7%)

Query: 15  DTVLAGLISLVVFGPIVGVVLDGYSFNLEPARVALLVAIVMVGRFAMSLFLQTPKGVKIL 74
           DT   G ++ +     V ++  G  F L   +   ++A++       +L  + P G +I+
Sbjct: 13  DTARTGGLARLAVAATVALLFAGGGFLLHAEQQGQVIALLAAFVAVFALAEKVPVGRRIV 72

Query: 75  QGFESTGSGVHVLAPDYKSRLRWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGL 134
               +    V++ A            AL ++AI   +    Y L ++    ++     GL
Sbjct: 73  GLCRAHPGTVNLTA------------ALSILAIAAALREEHYTLLMMATVALFATAAAGL 120

Query: 135 NIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLR 194
            + +  AG+ +    AF+A+GAY  AL   + G+    VL +A +AAA+ G +L  PVLR
Sbjct: 121 TLQMAFAGVPNFAGAAFFAVGAYVAAL-LGHTGIPHLLVLLIAGLAAAVLGLVLLLPVLR 179

Query: 195 MHGDYLAIVTLGFGEIIR--LVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFH 252
             G Y A+VT+ FG ++R  L +N+ L   GGP GM V S +  GL+F +  + G  P+ 
Sbjct: 180 TRGHYAALVTIAFGLLLRAFLEVNDVL---GGPQGMKVKSFSLFGLDFSRVTEIG--PYD 234

Query: 253 EFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNH 312
             F + Y      LF  +  FLV         RL    VG A +A+R DE+A    GL+ 
Sbjct: 235 VSFYLPYALASCALFA-LAFFLV--------RRLETSFVGVALDAVRSDEVAASVFGLSI 285

Query: 313 VLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIA 372
              K +AF +G +  G+AG  +    GFVNP+S  F +S ++L+I+VLGG+G+  G V+A
Sbjct: 286 ARWKATAFLLGNAMIGVAGALYGMMNGFVNPNSANFGDSLIMLSILVLGGLGNLWGAVVA 345

Query: 373 AFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLI 410
           A V+ V PE L++  E+R+++F +L++ ++ +RP GL+
Sbjct: 346 AVVILVIPEKLQAIQEFRLIIFALLVIAILRFRPSGLM 383