Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 841 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  128 bits (322), Expect = 6e-34
 Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 24/297 (8%)

Query: 125 LIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPL-AAIAAAL 183
           +I  L  + LN++VG  GL+  G+ A++ +GAY  AL  Q L   +   L + AA+   L
Sbjct: 36  VILALACMALNLLVGYTGLVSFGHGAWFGLGAYAAALIQQRLFPEWGLALAIPAAVVVTL 95

Query: 184 AGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEFGKR 243
           A   +G+ VLR  G Y +++TL    +   V   W + TGG NG+               
Sbjct: 96  AAIPVGYVVLRRRGVYFSLLTLALTALAYTVAFRWTAVTGGENGL--------------- 140

Query: 244 AKDGGIPFHEFFGIDYNPNIKFLFIYI-VLFLVVLAVLYIKHRLTRMPVGRAWEALREDE 302
              GG+    F G+D + N  F ++     FL++L +     R  R PVG    A+RE+E
Sbjct: 141 ---GGVNRGPFLGLDVDRNATFYWVVAGAAFLIILTL----QRFVRSPVGTVLVAIRENE 193

Query: 303 IACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGG 362
              R +G +    K++ FT+ A     AG   A    F +        S  +LA+VV+GG
Sbjct: 194 QRARFIGYDTRAYKIACFTLSAGLTAFAGALLAFNHRFASADPIAIAFSGELLAMVVIGG 253

Query: 363 MGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLIRISRTGVTP 419
           M S +G  + A    +  E L  ++   +  FG+L +  +++ P GL+ ++   + P
Sbjct: 254 MRSFLGPALGALFFVLFREFLSMWTANWLFWFGLLFMAFIVFSPTGLVGVAGRLLAP 310