Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 347 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  162 bits (411), Expect = 1e-44
 Identities = 102/328 (31%), Positives = 162/328 (49%), Gaps = 37/328 (11%)

Query: 102 LIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 161
           L+   ++ P   N+Y L +  L  I V    GLNI+ G  GL+ LG  AF A+GAY +A 
Sbjct: 29  LLATLVLAPFVLNQYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMAVGAYTVAF 88

Query: 162 GYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSF 221
               +G  F   +  A + +AL G ++G P LR+ G YLAI T+    I+  V  +W+S 
Sbjct: 89  FEGQVGTPFLLNILAAGLVSALVGVLVGIPSLRVKGLYLAIATIAASVILHFVFTHWVSV 148

Query: 222 TGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLY 281
           TGG  G+ V      GLE          PF                +Y V+  +   ++ 
Sbjct: 149 TGGVRGINVVPARLFGLELAS-------PF---------------ALYFVIVPITCLMVL 186

Query: 282 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFV 341
               L R  +GRA+ A+R+ +I+   +G+  +  KL +F + +  AG+AG  +A +   V
Sbjct: 187 GAANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLMSFALSSFYAGVAGGMWAYFFRVV 246

Query: 342 NPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLR---------------SF 386
            P SF F  S   LA V++GG+G+ +G V+ A  +T+ PELL+               + 
Sbjct: 247 TPESFPFATSIFFLAAVIVGGLGTIIGSVLGAAFMTLVPELLKYVVDWLAPIFPNAGAAL 306

Query: 387 SEYRVLLFGVLMVVMMIWRPRGLIRISR 414
           S  R ++FG L+++ +++ P GL  + R
Sbjct: 307 SPVRTIVFGALIILFLVFEPHGLAEMVR 334