Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 293 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  130 bits (327), Expect = 5e-35
 Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 35/305 (11%)

Query: 120 VVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAI 179
           +V L L+  LL  G+ + +  A +  LG   F A+GAY        LG  F   +    +
Sbjct: 15  LVNLCLLNTLLAYGVWLALA-ANMFTLGTGGFMAVGAYCSVYLTMQLGAPFAVAVVAGGL 73

Query: 180 AAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLE 239
            AA    ++G PVLR+ GDY  + T  F E++R++  NW + TGG  G+           
Sbjct: 74  LAAAVALVIGAPVLRLRGDYFMLATFAFTEVVRVIALNWDAVTGGAIGI----------- 122

Query: 240 FGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALR 299
                   GIP        Y    +       L L+VL  LY    L R   GR+  A+R
Sbjct: 123 -------YGIP-------RYTETWQ-------LVLLVLIALYFVFALRRSYFGRSIAAIR 161

Query: 300 EDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVV 359
           +D++   +MG+N    +LS F      +G  G   A    FV PS F    S   LA  +
Sbjct: 162 QDDVMSEAMGVNVFGQRLSLFVASGFVSGGVGGLAAHLNFFVGPSDFGLLRSVDALAYPI 221

Query: 360 LGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLIRISRTGVTP 419
           LGG+ + +G ++ A   T+ PELLR  S++R +L G+L++ ++++ P G + + R    P
Sbjct: 222 LGGVNALLGPLVGAIFTTLLPELLRFSSQWREILMGLLILAVVLFLPGGAMSLLRW--RP 279

Query: 420 RKGVA 424
           RK  A
Sbjct: 280 RKAAA 284