Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 314 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  181 bits (459), Expect = 3e-50
 Identities = 114/329 (34%), Positives = 171/329 (51%), Gaps = 22/329 (6%)

Query: 92  KSRLRWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAF 151
           +SRL  +I   +++A+V  I    + L V  L  I+ L  LGL I++G AG + LG+  F
Sbjct: 6   RSRLTPLIALALIMALVPMIAPTSFHLRVAALVWIFSLAALGLTILMGYAGQVSLGHAGF 65

Query: 152 YAIGAYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEII 211
             IGAY +A+G  +LGL     L L A+ + L   ++G P+L++ G YLAI TLGFG I+
Sbjct: 66  LGIGAYAVAIGPAHLGLDPLLCLLLGAVLSGLIAWLVGRPILKLKGYYLAIATLGFGVIV 125

Query: 212 RLVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIV 271
            L+L +    TGGP+GM V   T     FG R                      L  Y V
Sbjct: 126 ALILYSETELTGGPDGMSVSRITL----FGWRVTGA------------------LNWYWV 163

Query: 272 LFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAG 331
               +L    I   +   P GRA  AL + E+A    G++    KL+AF + A  A +AG
Sbjct: 164 SAGALLIGALIALNIAASPTGRALRALHDSEVAAAGAGIDVSAKKLAAFVVAAVYAAVAG 223

Query: 332 VFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRV 391
              A+  G + P + +F  S  ++A+V++GG+GS  G V+ A  L V P+ L +F EY  
Sbjct: 224 GLLAAMNGLITPEAASFSHSVELVAMVIIGGLGSVFGTVLGAAFLVVLPQTLTAFQEYEQ 283

Query: 392 LLFGVLMVVMMIWRPRGLIRISRTGVTPR 420
            + G+L++V MI+ P+G++   R  +  R
Sbjct: 284 AVLGLLIMVFMIFLPQGIVPSLRAMIEER 312