Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  139 bits (351), Expect = 1e-37
 Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 20/315 (6%)

Query: 96  RWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIG 155
           RW +P  I +  V P       L V +L  IY L  +G N++ G  GLL  G+ AF+  G
Sbjct: 26  RWRVPLTIAVLAVLPFVLPSQALAVNVL--IYGLFTVGFNLLFGYTGLLSFGHAAFFGTG 83

Query: 156 AYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVL 215
           AY   +   +LG G++  +    + A+L   ++G   +R  G Y  +VTL   +++  V 
Sbjct: 84  AYLTGMAIAHLGFGWFPAMLTGIVGASLLSAVIGALSIRTRGIYFCMVTLALAQLVYYVA 143

Query: 216 NNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGID-YNPNIKFLFIYIVLFL 274
                +TGG NG+        G    K    GG      F ++  NP  K+   Y ++F 
Sbjct: 144 LQASGWTGGENGL-------RGFTVAKADLIGG------FSVNLLNPLAKY---YFIMFF 187

Query: 275 VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFF 334
             LA+ ++  R+   P G A EA+RE+E   R+ G +    KL +F +  +  GLAG   
Sbjct: 188 AALALWFVS-RVLNSPFGAAIEAVRENETRARACGFDVERTKLLSFILSGALCGLAGTLS 246

Query: 335 ASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLF 394
           A +   V   + +   S++++ + +LGG GS  G  + A V  +  ++   ++ +  L+ 
Sbjct: 247 ALHLSIVPLDALSVHTSSIVVMMTMLGGAGSFFGPFVGALVFLLIEDVASLWTTHWQLIV 306

Query: 395 GVLMVVMMIWRPRGL 409
           G++ ++ +++ P+G+
Sbjct: 307 GIVFILFVLFLPKGI 321