Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 648 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  166 bits (421), Expect = 1e-45
 Identities = 102/324 (31%), Positives = 167/324 (51%), Gaps = 28/324 (8%)

Query: 103 IVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 161
           +   ++FPI   N Y + ++   +IY +L  GL+IVVG  G + LG+   + +GAY   +
Sbjct: 20  VAALLLFPIGIDNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGLGAYAAGV 79

Query: 162 GYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSF 221
               L   FW  +P A +  A  G +L  P LR+ G YLA+VTL FG II++++N     
Sbjct: 80  LVFKLSAPFWITVPFAIVFTAGFGALLALPALRVSGPYLAMVTLAFGTIIQILINEMSFL 139

Query: 222 TGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLY 281
           T GP G+ +  P+  G +   R                       + ++V  L+VLA L 
Sbjct: 140 TDGPMGIKLEKPSLFGHKLDDRE----------------------YYWVVAVLMVLA-LV 176

Query: 282 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFV 341
           + HR+ R  +GRA+EALR   +A   MG++    K+ AF I A  AGLAG  +A  + ++
Sbjct: 177 VVHRILRSHLGRAFEALRGSPVASDCMGVSVYRYKVYAFVISAGFAGLAGSLYAYSEQYI 236

Query: 342 NPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVM 401
           +P+S+ F  + L L  V++GG  S +G ++ A ++ + P+LL     +R +  G+ + V+
Sbjct: 237 SPNSYNFELTVLFLLAVIMGGRKSRIGSMLGATIIVLLPKLLDDVVLFRYVSVGLAVAVL 296

Query: 402 MIWRPRGLIRISRTGVTPRKGVAP 425
           +      ++ I R   TP +   P
Sbjct: 297 V----AAVVAIRRQRATPGQMAIP 316