Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 327 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  165 bits (417), Expect = 2e-45
 Identities = 98/314 (31%), Positives = 166/314 (52%), Gaps = 22/314 (7%)

Query: 96  RWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIG 155
           R ++  + V+  V P   + Y+L VV L +++ +L LG+++V+G  G   L + AF+ IG
Sbjct: 13  RAVLLGMAVVLAVLPFTTSGYVLYVVNLLMVFSVLALGMHLVIGETGQFALSHAAFFGIG 72

Query: 156 AYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVL 215
            Y   L        F+  +   A+ +A  G ++G   LRM   YLA+ T  FGE ++ V 
Sbjct: 73  IYTAGLINNQWQPPFFVSILAGALLSAALGWVIGLLALRMRDIYLALATFAFGEAMQWVF 132

Query: 216 NNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLV 275
            NW S T G NG+ +           K A  GG              +  L  Y  +  +
Sbjct: 133 LNWESVTNGSNGLQM-----------KPASLGGYQL-----------MNDLQAYPFVIAI 170

Query: 276 VLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFA 335
              +L++   L+R  +G ++ A+RE ++A  +MG+N   VK++AF + A+ AG+AG  + 
Sbjct: 171 AALMLWLTVTLSRSRLGSSFRAVRESDVAAVAMGVNTRTVKVTAFVLSAAFAGVAGGMYT 230

Query: 336 SYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFG 395
            +  F++P S  F  + LIL +VV+GG+GS  G V  A V  +A ELLR    Y+ +++G
Sbjct: 231 LFTSFIHPESLGFQTTILILTMVVVGGLGSVRGAVAGAIVFGLASELLRQAPSYQEIIYG 290

Query: 396 VLMVVMMIWRPRGL 409
            ++++ M++ P+G+
Sbjct: 291 GILMLFMMFLPKGM 304