Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  151 bits (381), Expect = 6e-41
 Identities = 95/312 (30%), Positives = 162/312 (51%), Gaps = 25/312 (8%)

Query: 101 ALIVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGL 159
           A ++ A+  P+ F   ++L +     + +L+ +GLN++ G AG + LG+ A  A+G+Y  
Sbjct: 26  AAVLAALSLPLWFRGDFILFMATQAGVMMLVAIGLNLLTGYAGQVSLGHGALVAVGSYTT 85

Query: 160 ALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWL 219
           AL        FW         + LAG ++  P LR+   Y A+VTL F +++  +L  W 
Sbjct: 86  ALLMIDAHWSFWLAALAGMAVSTLAGLVMALPALRLSTWYFALVTLTFAQVVTDLLVEWR 145

Query: 220 SFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYI-VLFLVVLA 278
           S T G +G+    P  +G              H    ++         +Y+ V   VVLA
Sbjct: 146 SLTRGFSGLVGIPPPAIGA-------------HVLGPVE---------VYLAVAACVVLA 183

Query: 279 VLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQ 338
            L +++ L+R   GR   A R++ +A  + G++ + +KL AF + A+ AGLAG F+A  +
Sbjct: 184 FLGVRN-LSRSRYGRGMVAARDNPLAATASGVSLLRIKLFAFAVSAALAGLAGAFYAVQK 242

Query: 339 GFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLM 398
             + P  FT   S   L I+V+GG+G   G V+   V  + PELL     +R+L++GV++
Sbjct: 243 TVITPEDFTADFSIFFLLIIVVGGLGRLWGPVVGTLVFFLLPELLGPLQSWRLLIYGVVL 302

Query: 399 VVMMIWRPRGLI 410
           +V+M++ P G++
Sbjct: 303 LVLMVFAPHGIM 314