Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 346 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  162 bits (410), Expect = 1e-44
 Identities = 105/329 (31%), Positives = 162/329 (49%), Gaps = 42/329 (12%)

Query: 101 ALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 160
           A ++     P++ + Y+L +  +  I+V+  LGLN+  G AGL+ L + AF  +G Y +A
Sbjct: 28  AFVLSLFTLPLWGSDYVLAMACIVGIHVIAALGLNLTTGNAGLISLSHGAFIGVGCYTVA 87

Query: 161 -LGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWL 219
            LG Q  G+ F+  LP+A   AA  G I+G P LR+ G YLAI TL    I+      W 
Sbjct: 88  WLGKQ--GVPFYIALPVAGFVAAFLGVIVGLPSLRVKGLYLAIATLAAHFILSFAFREWD 145

Query: 220 SFTGGPNGMPVPSPTFLGLEF-GKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLA 278
           + TGG +G  +P     G E  G R                     F  I++  F + +A
Sbjct: 146 AVTGGVSGTSIPRANLFGFELVGDRRN-------------------FYLIFVCAFAMAVA 186

Query: 279 VLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQ 338
                  L R  +GRA+ A+R+ +I+   +G++ +  KL+AF IGA  AG+AG     + 
Sbjct: 187 A----RNLARTHIGRAFVAVRDRDISAEILGVHLLRTKLTAFAIGAFYAGVAGGLLGYFY 242

Query: 339 GFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYR-------- 390
           G + P  F    S   LA V++GG+G+ +G V+ A  +T  PE LR  +           
Sbjct: 243 GSITPDYFVLTLSVFYLAAVIVGGLGTVLGSVLGAVFMTFVPEGLRLLASVSSQAFPGVA 302

Query: 391 -------VLLFGVLMVVMMIWRPRGLIRI 412
                   ++FG+L++V +I+ P GL  I
Sbjct: 303 GLLLPMGQVVFGLLIIVFLIFEPHGLAAI 331