Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 284 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  161 bits (408), Expect = 2e-44
 Identities = 106/296 (35%), Positives = 159/296 (53%), Gaps = 34/296 (11%)

Query: 116 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLP 175
           Y  +++ L  I V+L L LN++ GL G + LG+ AF+ +GAY  AL     G   W  LP
Sbjct: 4   YETSILTLVAINVILALSLNLISGLCGQVSLGHAAFFGVGAYATAL-LAKAGANLWLTLP 62

Query: 176 LAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTF 235
            A + A + G ++GF  LR+  D+LAI T+  G +                        F
Sbjct: 63  AALLLAGVCGLVVGFCSLRVRDDFLAIATMAAGFL------------------------F 98

Query: 236 LGLEFGKRAKDGGIPFHEFFGIDYNPN--IKFLFIYIVLFLVVLAVLYIKHRLTRMPVGR 293
           LG+     A  G +      GI   P   ++  + Y V+   V A ++    + +  +G 
Sbjct: 99  LGVVRTSDALGGEL------GISQIPESGLEGFYPYFVVLCAVAAGVFCTW-VKKSWLGY 151

Query: 294 AWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESAL 353
           A+EA+  DE A RS+G++    KL+AF +G   AG+AG  +A Y G V   +F F  S +
Sbjct: 152 AFEAVSADETAARSLGIDTPRFKLAAFALGTGLAGVAGCLYAYYLGTVGVEAFGFPVSVM 211

Query: 354 ILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGL 409
           ILA+VV+GGMGS  G V+AA +LT+APE  R  ++Y++L+FG+L+ VMM + P GL
Sbjct: 212 ILAMVVIGGMGSIWGSVLAAALLTLAPEWFRFINDYKLLVFGLLLFVMMRFVPGGL 267