Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 358 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  161 bits (408), Expect = 3e-44
 Identities = 103/319 (32%), Positives = 160/319 (50%), Gaps = 34/319 (10%)

Query: 102 LIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 161
           L+   +  P   ++Y L  +   LIY ++GLGL ++ G  G   +G+ AF   GAY   +
Sbjct: 28  LVAFLLAAPWVIDEYWLAQLTFVLIYGIVGLGLMLLAGFTGQFSIGHAAFLGAGAYTQGV 87

Query: 162 GYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSF 221
               LG+ F   L  AA  +A  G ++  P LR+ G YL I TL FG I+  V   W S 
Sbjct: 88  -LTNLGVPFPLALVAAAALSAAVGVVVALPALRVKGIYLGIATLSFGFIVEEVFARWESV 146

Query: 222 TGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLY 281
           TGG  G+ V SP   G   G  + +G                   F ++ L + VLA L 
Sbjct: 147 TGGNAGLHVKSPQLFGWSLG--SGEG-------------------FYFLCLVVAVLATLG 185

Query: 282 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFV 341
           I + L R P GRA+ A+R+ EI+ +SMG++    K  +F I A+ AGL G  +A    F+
Sbjct: 186 ILN-LLRSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYAHKLSFI 244

Query: 342 NPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-----------R 390
           +P  F+  +S  +L +VV+GG+GS  G  + A  L   P+L+    ++           +
Sbjct: 245 SPDQFSILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLISIGKDWLPEAIGQAPGLQ 304

Query: 391 VLLFGVLMVVMMIWRPRGL 409
            L++GV+++  +++ P GL
Sbjct: 305 GLVYGVVLIAFVLFEPLGL 323