Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 596 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  151 bits (382), Expect = 5e-41
 Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 27/312 (8%)

Query: 101 ALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 160
           A  +IA+V  +F N Y L +  +  +Y L   G+N++VG AG   LG    +A GAYG+A
Sbjct: 14  AAALIAVV-SMFGNDYYLRIAFMMCVYYLCAAGMNVLVGYAGQKSLGQAGLFAAGAYGVA 72

Query: 161 LGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLS 220
           L      +  W  L LAA+ + L G ++  P LR+ G YLA+VTL FG ++  ++  W  
Sbjct: 73  LLTSRTDMDPWLALALAAVISGLCGVLIALPSLRVKGPYLAMVTLAFGIVVEKLVGEWTD 132

Query: 221 FTGGPNGMPVPSP-TFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAV 279
             GG  G+    P T+ G                               +++L +V+ A 
Sbjct: 133 VFGGAQGIYGIRPLTWKGAPLDTTQ------------------------WVILGIVLCAA 168

Query: 280 LYIKHR-LTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQ 338
           L++  R L     GRA  +L+ DEIA  S+G+     K+ AF + A T G+AG   A   
Sbjct: 169 LHLLLRNLLGGRFGRALLSLQADEIASSSVGVRVYRAKVMAFVVAAVTCGIAGALVAQQN 228

Query: 339 GFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLM 398
            ++N    TF  S  IL +V+ GG GS  G ++ A +LT+   LL  +   +  L+G L+
Sbjct: 229 QYINSDFITFHLSIFILLLVLFGGAGSMYGPLVGAVLLTLTDALLARWPSAQHFLYGFLL 288

Query: 399 VVMMIWRPRGLI 410
           +  +   P G++
Sbjct: 289 LFALYVMPGGVV 300