Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  404 bits (1038), Expect = e-117
 Identities = 216/419 (51%), Positives = 287/419 (68%), Gaps = 7/419 (1%)

Query: 9   IKKSVVDTVLAGLISLVVFGPIVGVVL--DGYSFNLEPARVALLVAIVMVGRFAMSLFLQ 66
           + +++     + L+   V  P++G+ L  DG S  +  ++ +  ++I+ V    M L + 
Sbjct: 1   MNRNLKQAFFSALLVWAVAFPVLGLKLSIDGISLVVH-SQGSFTISIIAVCSVLMFLRVL 59

Query: 67  TPKGVKILQGFESTGSGVHVLAPDYKS---RLRWIIPALIVIAIVFPIFANKYLLTVVIL 123
             K    + G  S    +     +Y +     R++I  LIV+A+V+P F ++  + +  L
Sbjct: 60  FDKQWSSVMGRRSDRKLIPPAVSNYLTLPKTQRYVIIGLIVVALVWPFFGSRGAVDIATL 119

Query: 124 GLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIAAAL 183
            LIYVLLGLGLNIVVGLAGLLDLGYV FYA+GAY  A+   YLG  FW  LP+A + AA 
Sbjct: 120 ILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYAMLSHYLGWSFWVCLPIAGLMAAT 179

Query: 184 AGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP-VPSPTFLGLEFGK 242
            G +LGFPVLR+ GDYLAIVTLGFGEIIRL L N   +TGGPNG+  +P P F GL F +
Sbjct: 180 FGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDWTGGPNGISNIPKPEFFGLTFER 239

Query: 243 RAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDE 302
           RA +G   FHEFFG+ YN   K +F+Y+V  L+ L  L++ +RL RMP+GRAWEALREDE
Sbjct: 240 RAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDE 299

Query: 303 IACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGG 362
           IACR++GLN  ++KLSAFT+GA  AG AG FFA+ QG V P SFTF ESA+ILAIVVLGG
Sbjct: 300 IACRALGLNPTVIKLSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGG 359

Query: 363 MGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLIRISRTGVTPRK 421
           MGS +GV++AA V+ + PEL+R FSEYR+L+FG LMV+MMIWRP+GL+ + R  +  R+
Sbjct: 360 MGSQLGVILAAIVMILLPELMREFSEYRMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418