Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 329 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  151 bits (381), Expect = 3e-41
 Identities = 107/325 (32%), Positives = 169/325 (52%), Gaps = 27/325 (8%)

Query: 94  RLRWIIPALIVIAIVFPI-----FANKY--LLTVVILGLIYVLLGLGLNIVVGLAGLLDL 146
           RL  ++  L+    +FP      F+ KY  LL  +   +I  +L + L+++VG+AGL+ L
Sbjct: 7   RLSLLLLVLLAALALFPAWGPLAFSAKYAFLLQKLTGIMILAILAMSLDLLVGVAGLVSL 66

Query: 147 GYVAFYAIGAYGLAL-GYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTL 205
           G+ AF+ +G Y LAL   QY     W VLP A  A A    ++GF  +R  G Y  +VTL
Sbjct: 67  GHAAFFGLGGYMLALLSPQYEAANAWVVLPAAMGAVAAVSAVVGFLAIRTAGIYFIMVTL 126

Query: 206 GFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDY-NPNIK 264
            FG++     N+     GG +G  +                   P  E FGI   N   K
Sbjct: 127 AFGQMGYYFFND-SKLAGGSDGAYIYVK----------------PNVEAFGITLVNLESK 169

Query: 265 FLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGA 324
             F ++VL  +V   L+++  L   P GR   A+  +E   R +G N ++ KL AF +  
Sbjct: 170 QAFFFVVLGCLVAVYLWLRVVLAS-PFGRVLAAIGVNEGRVRGLGFNPMVYKLVAFALAG 228

Query: 325 STAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLR 384
           + AGLAG   A+  GFV+P+   + +S  +L +V+LGGMG+  G V+ AF+L +A   L 
Sbjct: 229 ALAGLAGFLAATQYGFVSPAMLGWHQSGHVLVMVILGGMGTLFGPVLGAFILELAHFGLE 288

Query: 385 SFSEYRVLLFGVLMVVMMIWRPRGL 409
           + +E+ +L  GVL++ +++  P+G+
Sbjct: 289 AVTEHWLLPMGVLVITIVLALPKGV 313