Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 315 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  168 bits (426), Expect = 2e-46
 Identities = 99/313 (31%), Positives = 166/313 (53%), Gaps = 23/313 (7%)

Query: 99  IPALIVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157
           + AL ++  + P+ F+N Y   V +  +   +L +GLN+++G AG + LG+  F+A+GAY
Sbjct: 11  LAALAIVITLAPLGFSNSYFYDVGVNAMFNAILCVGLNLLIGYAGQISLGHAGFFALGAY 70

Query: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217
           G  +  +  G+     L L+A    +   ++  P+L++ G YLA+ TLG G II +VL  
Sbjct: 71  GSGILTERYGVPAIGALVLSASVVGILAFVVARPILKLKGHYLAMATLGIGIIIHIVLKT 130

Query: 218 WLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVL 277
               TGGP+GM + +   LG                 F I  +     ++ ++   L+VL
Sbjct: 131 EAGITGGPDGMSLGNFKMLG-----------------FTIKGDQ----MWYWVTGVLLVL 169

Query: 278 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 337
           AV ++   L   PVGRA  A+   E+    +G++    K+  F + A  A + G  FA  
Sbjct: 170 AV-WLSLNLIESPVGRALRAVHGSEVGAEVVGVDTSSYKVLVFVVSAVFASVVGSLFAHK 228

Query: 338 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVL 397
            GF+ P   +FF S  ++ +VVLGGM S  G +I A +LT+ P++L +  +Y  ++ G +
Sbjct: 229 NGFITPDISSFFHSVELVTMVVLGGMASIYGALIGAVILTLLPQVLAAVEQYEAMILGAI 288

Query: 398 MVVMMIWRPRGLI 410
           M+  MI+ P+GL+
Sbjct: 289 MMGTMIFMPKGLL 301