Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 324 a.a., branched-chain amino acid ABC transporter permease from Fusobacterium nucleatum SB010

 Score =  193 bits (491), Expect = 6e-54
 Identities = 124/336 (36%), Positives = 188/336 (55%), Gaps = 52/336 (15%)

Query: 90  DYKSRLRWIIPALIVIAIVFPIFA-------NKYLLTVVILGLIYVLLGLGLNIVVGLAG 142
           D   +L +II  +++I + F +F+       ++Y + ++IL LI ++L   LNI VG  G
Sbjct: 2   DKNKKLSYIITYVLLIVLYFILFSLISSGFISRYQVGILILILINIILAASLNITVGCLG 61

Query: 143 LLDLGYVAFYAIGAYGLAL--------GYQYLGLGFWTVLPLAAIAAALAGCILGFPVLR 194
            + LG+  F +IGAY  AL        GYQ    G+   L +  + A + G I+G P LR
Sbjct: 62  QITLGHAGFMSIGAYTAALLTKSGFLSGYQ----GYIVALIIGGLVAGVIGFIIGIPALR 117

Query: 195 MHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEF 254
           + GDYLAI+TL FGEIIR VL  +  FTGG  G+                   GIP    
Sbjct: 118 LTGDYLAIITLAFGEIIR-VLIEYFKFTGGAQGLT------------------GIPRVNN 158

Query: 255 FGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVL 314
           F + Y      + I+ V+F+   +++  +H       GRA  A+REDEIA  + G+N   
Sbjct: 159 FTLIY-----VITIFSVIFMY--SIMTSRH-------GRAVLAIREDEIASGASGINTTY 204

Query: 315 VKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAF 374
            K  AF + A  AG+AG  +A   G +    F +  S  IL +VVLGGMGS  G +++A 
Sbjct: 205 YKTFAFVLSAIFAGIAGGIYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAV 264

Query: 375 VLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLI 410
           VLT+ PE+LRSF+EYR++++ +++++MM++RP+GL+
Sbjct: 265 VLTILPEVLRSFAEYRMIVYPLILIIMMLFRPQGLL 300