Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola 67-19

 Score =  381 bits (978), Expect = e-110
 Identities = 205/410 (50%), Positives = 282/410 (68%), Gaps = 11/410 (2%)

Query: 12  SVVDTVLAGLISLVVFGPIVGVVL--DGYSFNLEPARVALLVAIVMVGRFAMSLFLQTPK 69
           ++V+ V++ L+ LV+   ++G+ L  DG    +  A     + I+          L  P 
Sbjct: 5   TLVNAVVSALVLLVLATFVMGMQLSLDGTRLVVHGAENVRWMWIIAACALVFLFQLLRPV 64

Query: 70  GVKILQGFESTGSGVHVLAPDYKS---RLRWIIPALIVIAIVFPIFANKYLLTVVILGLI 126
              + QG ++  SG  ++ P +     R + +  ALI+ A+ +P   ++  + +  L +I
Sbjct: 65  ---LAQGAKNV-SGPGLVLPSFDGSTPRQKLLALALIIAAVAWPFVVSRGTVDIATLTMI 120

Query: 127 YVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIAAALAGC 186
           Y++LGLGLN+VVGL+GLL LGY  FYAIGAY  AL   Y GLGFW  LPLA + AAL+G 
Sbjct: 121 YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYGLGFWQCLPLAGLTAALSGF 180

Query: 187 ILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP-VPSPTFLGLEFGKRAK 245
           +LGFPVLR+ GDYLAIVTLGFGEI+R++L N   FTGGPNG+  +P PTF GLEF +  +
Sbjct: 181 LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNGISQIPKPTFFGLEFNRAPR 240

Query: 246 DGGIP-FHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIA 304
           +GG   FH FFG++Y+P+ + +F+Y+V  L+VL  L++ +RL RMP+GRAWEALREDEIA
Sbjct: 241 EGGWDTFHHFFGLNYDPSDRIIFLYMVALLLVLLTLFVINRLLRMPLGRAWEALREDEIA 300

Query: 305 CRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMG 364
           CRS+GL+   +KL+AFTI A+ AG AG  FA+ QGFV+P SFTF ESA +LAIVVLGGMG
Sbjct: 301 CRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFVESAFVLAIVVLGGMG 360

Query: 365 STVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLIRISR 414
           S   V++AA +L V+ EL+R  +EY +LL G LMV+MMIWRP+GL+ + R
Sbjct: 361 SQFAVILAAILLVVSRELMRDLNEYSMLLLGALMVLMMIWRPQGLLPMKR 410