Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  166 bits (421), Expect = 7e-46
 Identities = 102/320 (31%), Positives = 169/320 (52%), Gaps = 28/320 (8%)

Query: 94  RLRWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYA 153
           RL  ++    VIA++     N + L + IL     ++ +GLN+++G AG + LG+  F+ 
Sbjct: 8   RLTGLLALGAVIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFG 67

Query: 154 IGAYGLALGYQYLGLGFWTVLPLAAIAA--ALAGCILGFPVLRMHGDYLAIVTLGFGEII 211
           IGAY  A G      G+  ++ L A AA   L   ++  P+LR+ G YLA+ TLG G I+
Sbjct: 68  IGAY--ASGVLVGTYGWPPIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIV 125

Query: 212 RLVLNNWLSFTGGPNGMPVPSPTFLGLE-FGKRAKDGGIPFHEFFGIDYNPNIKFLFIYI 270
            +VL      TGGP+GM V      G+E +G++                         Y 
Sbjct: 126 SIVLRTESGLTGGPDGMMVEPFRIFGVELYGEKVW-----------------------YW 162

Query: 271 VLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLA 330
           V+ ++++ V+++   L   P+GRA  A+   E+A   +G++    K+  F + A  A +A
Sbjct: 163 VVGVLLVGVVWLSLNLIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVA 222

Query: 331 GVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYR 390
           G  FA Y G + P+   FF+S  ++ +VV GGM ST G V+ A VLT+ P+ L  F +Y+
Sbjct: 223 GSLFAHYAGLITPAKADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQ 282

Query: 391 VLLFGVLMVVMMIWRPRGLI 410
            ++ G +++  M++ P+GL+
Sbjct: 283 QIVLGGILMATMVFMPKGLL 302