Pairwise Alignments

Query, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  157 bits (397), Expect = 3e-43
 Identities = 93/300 (31%), Positives = 162/300 (54%), Gaps = 17/300 (5%)

Query: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60
           M  ++L Q++NGL LG +Y LI++G T+++G++  +NFAHG  +++ AY+   +++L   
Sbjct: 1   MLNLYLFQILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTGN 60

Query: 61  FGIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQ 120
           F +          L+   +V     WVIERV  + + +   +  ++  +GI+LI+Q  + 
Sbjct: 61  FWL---------ALLIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASV 111

Query: 121 IAQG--AKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGR 178
           +  G   K   +P LL G   V +   FV   Y    I+ +   G+  L  +++ T+ G 
Sbjct: 112 MIWGPVGKSVAVPELLRG---VLVVGDFVYPYYRLFLIVFSGLVGLG-LWLLLERTRFGA 167

Query: 179 MCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKA 238
           + RA  +  +  S+LG N  R+ S  F +G A+A +AGVL     G   F    I+G+ A
Sbjct: 168 LVRAGSESTETVSLLGTNIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGV-A 226

Query: 239 FTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGR 298
           F   V+GG+GS  GA++GG+++G+ +SL + L       +  +  + V+++ RP GL GR
Sbjct: 227 FVVVVIGGMGSFSGALVGGLLVGVVQSLMTTLWPQG-ASLMIYGAMAVVILVRPYGLFGR 285