Pairwise Alignments

Query, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  134 bits (337), Expect = 3e-36
 Identities = 90/306 (29%), Positives = 158/306 (51%), Gaps = 22/306 (7%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGI 63
           I  Q + +G+ LG +Y +IA GY + +     +NF  G   M+ A +       L   G+
Sbjct: 3   ILTQLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLT----LVNMGL 58

Query: 64  ESFPLLILGTLIFTVVVTGVY-GWVIERVAYKP-LRNSTRLAPLISAIGISLILQNYAQI 121
             + ++ L      V + G + G V+ER+A +P ++  +    ++S I + +I  N A+ 
Sbjct: 59  NYWLMIPL------VCLFGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAEN 112

Query: 122 AQGAKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCR 181
             G      P+ L  +    +G+  + +   ++ +++ A   M  +    + +  G+   
Sbjct: 113 VWGRDDLKFPSPLPESPLHFLGANVLPM---EILVVIGALLMMLAVELFNRRSIYGKAVV 169

Query: 182 ATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLI---TLNYGTFDFYAGFIIGIKA 238
           AT  DR  A ++GINT  VI++ + + +  AA AGVLI   TL   +     G ++G+KA
Sbjct: 170 ATFNDRDAAKLMGINTGLVITFSYALSSMTAAFAGVLIAPLTLTGASM----GAVLGLKA 225

Query: 239 FTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGR 298
           F  A++GG+ S  G ++GGIILGI+E+     +++ YKDV    LL+++L  RP GL G+
Sbjct: 226 FAVAIIGGLTSGMGIVVGGIILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGK 285

Query: 299 PLVAKV 304
             + KV
Sbjct: 286 AAIKKV 291