Pairwise Alignments

Query, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 300 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

 Score =  141 bits (356), Expect = 2e-38
 Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 9/295 (3%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGI 63
           I + Q+ NG++L ++  L+AIG  +V+G++G+IN AHGE+  + AY+  ++     +F  
Sbjct: 5   IAVMQVFNGVSLFTILLLMAIGLAIVFGLMGVINMAHGELMALGAYMTYLAARFFEHFAP 64

Query: 64  ESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQ 123
               L +   + F   VT  +G+V+ER  +        L  L++  G+SL+LQ   +   
Sbjct: 65  GFMDLYLFAAIPFAFAVTFAFGYVLER-GFIRFFYDRPLDTLLATWGLSLMLQQAYRSIF 123

Query: 124 GAKQQGIP--TLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKY-TKLGRMC 180
           GA++  +P  + LAGAW    G   +QL   ++FI V   A +A   Y++ Y T  G   
Sbjct: 124 GAQEVSVPLASWLAGAWEPTAG---IQLPLNRIFI-VGLTALVATGVYLLLYRTSWGLKV 179

Query: 181 RATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFT 240
           RA  Q+R +A  +GI+T RV +  F +G+ +A +AG + T+  G+ +   G +  + +F 
Sbjct: 180 RAVTQNRAIAGAVGIDTHRVDAMTFALGSGLAGIAGAVFTM-IGSTNPGTGQLYIVDSFI 238

Query: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGL 295
             V GG+ SL G  L G  +  S++    L++          L++V+L FRP GL
Sbjct: 239 VVVFGGVQSLVGTALSGFSIAQSQTWLEYLMSGSMAKATILLLVIVVLYFRPNGL 293