Pairwise Alignments

Query, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  556 bits (1432), Expect = e-163
 Identities = 284/304 (93%), Positives = 298/304 (98%)

Query: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60
           MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY
Sbjct: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60

Query: 61  FGIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQ 120
           FG+ESFPLL+LGTL+FT+VVTGVYG+ IER+AYKPLRNSTRLAPLISAIGISLILQNYAQ
Sbjct: 61  FGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQ 120

Query: 121 IAQGAKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMC 180
           I+QGA+QQG+PTLL GA RV++GSGFVQLTYTK+FILVAAF GM LLTYVIKYTKLGRMC
Sbjct: 121 ISQGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMC 180

Query: 181 RATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFT 240
           RATQQDRKMASILGINTDRVISYVFVIGA MAALAGVLIT+NYGTFDFYAGFIIGIKAFT
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFT 240

Query: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGRPL 300
           AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLV+ILIFRPQGLLGRPL
Sbjct: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPL 300

Query: 301 VAKV 304
           VAKV
Sbjct: 301 VAKV 304