Pairwise Alignments

Query, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Erwinia tracheiphila SCR3

 Score =  340 bits (872), Expect = 2e-98
 Identities = 175/301 (58%), Positives = 222/301 (73%), Gaps = 1/301 (0%)

Query: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIE 64
           FLQQ+ NG+TLGS Y LIAIGYTMVYGIIGMINFAHGEVYMIS+Y++ I +A L   GI+
Sbjct: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGID 67

Query: 65  SFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQG 124
              +LI    I  +V+   YGW IERVAYKP R+S RL  LISAIG+S+ LQNY  + QG
Sbjct: 68  VSWMLIGTGFIAAIVIASAYGWSIERVAYKPARSSKRLIALISAIGMSIFLQNYVSLTQG 127

Query: 125 AKQQGIPTLLAGAWRVDIGSGFVQLTYT-KVFILVAAFAGMALLTYVIKYTKLGRMCRAT 183
           ++   +P+L+ G W +   +GF     T ++ I V  F  M  LT  I+Y+++GR CRA 
Sbjct: 128 SRDLALPSLITGRWTLATANGFAATISTMQIVIWVVTFIAMLALTLFIRYSRMGRACRAC 187

Query: 184 QQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAAV 243
            +D KMAS+LGINTD VIS  FVIGAAMAA+AGVL+   YG  + Y GF+ G+KAFTAAV
Sbjct: 188 AEDLKMASLLGINTDCVISLTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAV 247

Query: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGRPLVAK 303
           LGGIGS+PGAMLGG+ILGI+E+L S  ++++YKDV SF+LL+V+L+  P G+LGRP V K
Sbjct: 248 LGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILGRPEVEK 307

Query: 304 V 304
           V
Sbjct: 308 V 308