Pairwise Alignments

Query, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 288 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Azospirillum sp. SherDot2

 Score =  159 bits (401), Expect = 9e-44
 Identities = 105/296 (35%), Positives = 162/296 (54%), Gaps = 14/296 (4%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGI 63
           I  Q LV+GL +G +Y L+A+G T+++G++ ++NFAHGE  M+  Y +  + AL A   I
Sbjct: 5   ILFQVLVSGLLIGLIYALVAVGLTLIFGVMDIVNFAHGEFLMLGMYASFWAFALFAIDPI 64

Query: 64  ESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQ 123
            + PL  L  L+F V V  VY  VI R+   P+     L+ + +  G+ ++L+  AQ   
Sbjct: 65  VALPLTAL--LLFAVGVI-VYQTVIRRILKAPM-----LSQIFATFGLMILLRGLAQFFW 116

Query: 124 GAKQQGIP-TLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRA 182
               + IP +L++G    ++  G VQ    +    + A      L   +  T+LG    A
Sbjct: 117 KPDHRLIPHSLVSG----NVAFGPVQFGLPQFVAALGAVGVTGALWMFLHRTRLGTALEA 172

Query: 183 TQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAA 242
           T  DR+ A+++GI+  ++ +  + IGAA A LAG LI   +  F       I I AF   
Sbjct: 173 TAIDREAATLMGIDGQKMFALAWGIGAACAGLAGGLIATFFPIFPEVGSNFILI-AFVVV 231

Query: 243 VLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGR 298
           VLGG GS+ GA L GII+G+ E L   L+  +YK     SLL+++L+ RP+GLLG+
Sbjct: 232 VLGGFGSVTGAFLAGIIVGLIEVLGGFLVGPEYKTAIVLSLLLIVLLVRPRGLLGK 287