Pairwise Alignments

Query, 344 a.a., twitching motility protein PilT from Pseudomonas simiae WCS417

Subject, 378 a.a., Type IV pilus assembly ATPase component PilU from Variovorax sp. SCN45

 Score =  249 bits (636), Expect = 8e-71
 Identities = 137/343 (39%), Positives = 207/343 (60%), Gaps = 1/343 (0%)

Query: 3   ITELLTASVHRGASDLHLSAGLAPMLRVDGEVWPLEGPVLSPPQVADLLSPLLNQHQQKD 62
           I +LL   V R  SDL ++A   P ++VDG+V  +    L       L   ++N  Q  +
Sbjct: 10  INDLLKLMVSRAGSDLFITADFPPAIKVDGKVTKVSQQALGAQHTLALTRSIMNDRQTAE 69

Query: 63  FETSLETDFAFELPDVARFRANVFRQDRGLSAVFRTIPSEVRSLESLGLGEVFQRIAQLP 122
           FE + E +FA     + RFR N F Q   +  V RTIP+++ +++ LG+ +V + +    
Sbjct: 70  FERTKECNFAISPTGIGRFRVNAFVQQGKVGMVLRTIPAKLPTIDDLGMPQVLKEVTMSK 129

Query: 123 RGLVLVTGPTGSGKSTTLAAMIDFLNQHRRHHILTLEDPIEFIHTPKMALINQRQVHRDT 182
           RGL ++ G TGSGKSTTLAAMID+ N++   HI+T+EDP+EF+H  K  ++ QR+V  DT
Sbjct: 130 RGLCILVGATGSGKSTTLAAMIDWRNENSFGHIVTVEDPVEFVHPHKNCVVTQREVGIDT 189

Query: 183 HGFSVALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRLVD 242
             +  AL++ LR+ PDVIL+GE+RD ET+  A+  AETGHL   TLH +SA + +DR+++
Sbjct: 190 DSWEAALKNTLRQAPDVILMGEIRDRETMEHAVAFAETGHLCMATLHANSANQALDRIIN 249

Query: 243 VFPAGEKAMVRSMLSESLQAVVSQVLVKKIGG-GRVAAHEIMLGTPAIRNLIREDKVAQM 301
            FP   +A +   LS +L+++VSQ LV    G GRVAA E++L TP I +LI + +V ++
Sbjct: 250 FFPEERRAQLLMDLSLNLRSLVSQRLVPTEDGLGRVAAFEVLLNTPLISDLIFKGEVGEI 309

Query: 302 VSAIQTGGALGMKTLDMSLKVLVGEGLVSREDAREKARVPTDI 344
              ++    LGM+T D +L  L     ++ EDA   A    D+
Sbjct: 310 KEIMKKSRNLGMQTFDQALFDLFESHSITFEDAIRNADSANDL 352