Pairwise Alignments

Query, 683 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  191 bits (484), Expect = 1e-52
 Identities = 146/513 (28%), Positives = 256/513 (49%), Gaps = 52/513 (10%)

Query: 168 LLQRGAPASQV----ALAQRQSLLAERILGAVNTVLAGDETAVQAADAFGRDANRFGQVL 223
           LL    PA+Q      L QR S +       +  ++A DE A  A D +G+  N++ Q+ 
Sbjct: 72  LLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQA--AFDQYGQLLNQYRQLE 129

Query: 224 SGMLQGNPGLRITQVEDRDARARLTEIAELFEFVSGSVDEILETSPQLFQVRASASNIFN 283
           S M   +   R+ ++ D   R  L          S  ++++++T  ++   +  A+N   
Sbjct: 130 SRMRTLSQADRLDELRDLLNRDLLAN--------SEQINKVMDTLVRINTDQTRATN--- 178

Query: 284 LSQTLLEEASHLATGFENLASGRSFDTIGGYVLGLLALTSIILIG--LVMVRETNRQLHE 341
                 E+A++   G   L            V+GLL   +++      ++ R   + + E
Sbjct: 179 ------EKAANQYAGAFAL------------VIGLLVAATVLTFACAFLLTRSIVKPIEE 220

Query: 342 TAEKNERNQNAIMRLLDEIEDLADGDLT-VTASVTEDFTGTIADSINYSVDQLRDLVATI 400
                          L   E +ADGDLT V  +   D    +  ++    D+LRD +  I
Sbjct: 221 A--------------LKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQI 266

Query: 401 NLTAGQVAGAVQDTQATAMHLAQASEHQAQQIAEASTAINQMAQSIDQVSANAAESSAVA 460
             +A Q+A A ++  A     A+  + Q  +I +A+TA+ +M  ++++V+ NA  +S  +
Sbjct: 267 AGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEAS 326

Query: 461 ERSVEIANKGNEVVHNTIHGMDNIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTN 520
             +      G ++V  T+  ++ +   +Q TAK I  L E S++IG ++ +I  +ADQTN
Sbjct: 327 SEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTN 386

Query: 521 ILALNAAIQASMAGDAGRGFAVVADEVQRLAERSSAATRQIETLVRAIQADTNEAVISME 580
           +LALNAAI+A+ AG+AGRGFAVVADEV+ LA R+  +T +IE ++ +IQ  T EAV SM 
Sbjct: 387 LLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMR 446

Query: 581 QTTTEVVRGARLAQDAGVALEEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQ 640
            +T        +A+ AG+AL+ I G    +      I++AA++Q   A ++   +  I  
Sbjct: 447 TSTERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNIND 506

Query: 641 ITTQTSSGSTATAESIGNLAKMASQLRRSVSGF 673
           ++ Q+++G+  T+ +   L+++A  L   V+ F
Sbjct: 507 LSVQSATGAHQTSAASAELSRLAVDLNGLVARF 539