Pairwise Alignments
Query, 1934 a.a., histidine kinase from Pseudomonas simiae WCS417
Subject, 1460 a.a., Sensor histidine kinase RcsC from Acinetobacter radioresistens SK82
Score = 725 bits (1871), Expect = 0.0
Identities = 503/1443 (34%), Positives = 744/1443 (51%), Gaps = 146/1443 (10%)
Query: 617 DDELREVFLEETDEV---LEVLHRNL---PNSADKIAQGEMRRAFHTLKGSGRMVRALVL 670
D E+ E+F+EE +E+ L+VL + P DK+ +RR FHTLKGSGRMV A
Sbjct: 23 DAEILEIFVEELEEIFTDLDVLIQQWIQQPEQQDKLTS--IRRYFHTLKGSGRMVGAKSS 80
Query: 671 AELAWAVENLLNRVLERSVTLGPDVQQVLD-------------------EAVALLPELIA 711
ELAW VE+LLNR++ ++ P + + ++ A+ L P ++
Sbjct: 81 GELAWTVEDLLNRIIAKTQAFTPAISRYVELVFKIYKYKLFYNFQNSQPHAIDLRPLVLI 140
Query: 712 DFAIDDQRQRDE-----------------VDALAARAHALASGMP--VPAAEPHDPM--- 749
+ Q + V L H + P V E H+
Sbjct: 141 GQQLQQQGSLEPALEELLELSWTLCSPETVTGLELVEHTAETLPPLGVEKLEIHEEFDSL 200
Query: 750 ---LLEIFRNEAQSHLDSLNHFLHQAAEHVPLQVSDELQRALHTLKGSAYMAGVLPIAEL 806
L IF E++ HL +++ FL+ + L RALHTL+GS+ MA V I E
Sbjct: 201 TAETLAIFLEESEEHLATIDEFLNNNEQGSNYNA---LIRALHTLRGSSAMAQVEHIFEA 257
Query: 807 ARPLDHLTREYKAHRLPLDLDEVELLLEAEGLFQRGLRDLDSD-PLAPIKGAEDLINRTQ 865
+ +++L + L +E LL + L L + + ++ N
Sbjct: 258 SSKVENLFKTMLQDELVSTSNETALLTHYAEFVRDYLYILKQECNIEQLEQVYQTFNHAW 317
Query: 866 SLLDHQLEALLDVRIKRDPQ-LIANFLAQGMDILLDAENLL--RRWQQHPGERQELTALL 922
E + D+ +PQ L++ L ++ LLDAE R ++P Q L
Sbjct: 318 ENYGFHQEPVDDLV---NPQGLVSRLLELEINQLLDAEFEFDQRVRTEYPEYLQLLVQQA 374
Query: 923 DELTTLGEGAHVADLHAIDALCEALLDLYGAVEESSLAVSERFFHEAEQAHEALISMLDQ 982
EL + A D E L + + L + + QAH+ LI + D
Sbjct: 375 QELVE--HTRNRASQGVYDFTLELLQSYQQLLAKPQLLNLDYAYELYTQAHQQLIYLFDT 432
Query: 983 LAAGQEISPAPARVEALREL-------------LDEALDPSATGLIKSDGSRVLSVSELG 1029
LAAGQ +S +PA L EL L +P + + ++ EL
Sbjct: 433 LAAGQRVSLSPAHQSLLEELSAFVQQEIEQVEELSTVTEPFKAPVDVAVLEHTFNLGELS 492
Query: 1030 A---ATQQLGHETER----DDEIVEIFLEEAVDILDSAGQSLKRWLLEPDNAAPLSSLQR 1082
A A + L H D ++ +IFLEEA ++L L W E L++L R
Sbjct: 493 ARIAADKALMHSEHSNQVADADLRDIFLEEAEELLAGMDSDLNSWTKESGQVTALNNLMR 552
Query: 1083 DLHTLKGGARMAEIEAIGDLAHELECLYEGLVDRRYSYTAELSHVLMASHERLALQLEEL 1142
LHTLKGGA M + +G +AHELE +Y+ +++ + + L ++ + LA +++ L
Sbjct: 553 YLHTLKGGANMVQATHMGLIAHELESIYQRIINGQVQVSTVLMSIIRLVQDELAERIQIL 612
Query: 1143 HHHQ---PLSDSAELIARVRALRQGS--APAAPAAAPPASG---------------ADPE 1182
Q P + E++ + ++ G A P A AD E
Sbjct: 613 REQQIDYPAPATIEILKNIESISTGVLVTTAEPKVAEEKLSESSQNIESDIADCTLADAE 672
Query: 1183 LLD-----------------IFLEEAADILDSSSAALSRWQAEPGNRQEVETLLRDLHTL 1225
+ + +FLEEA ++L ++ L +W E NR + L R+ H+L
Sbjct: 673 IAEHSEELQTDEQVRSIVEEVFLEEAEELLQTAHNLLDQWVEERSNRSLLLQLQRNAHSL 732
Query: 1226 KGGARMVEIAPIGDLAHELEFLYEGLSAGLLAPS---PELFALLQGCH-----------D 1271
KGGARM E+ P+ +A+ LE +E L S P L L+ D
Sbjct: 733 KGGARMAELEPVAVIAYALENTFEQFGLHNLTTSVYDPLLHTALRWLENAIFKEQYENFD 792
Query: 1272 RLAQMIDAVA-DGLPVGSV-----DKLIERIKTLVHPSDEPVTPVALPAGKAEAVVDPMA 1325
L +D++ +P + D ++ + P ++
Sbjct: 793 SLKHSLDSIQFTEIPAQLINQIPADNIVADSSLFEFVHGDGTEPPSMMGEWDNTERTENN 852
Query: 1326 DMVKISAELLDDLVNLAGETSIFRGRIEQQVNDARIALTEVETTIERMRDQLRRLDTETQ 1385
+M++ISA+L++ +++LAGE SI R R+E V L+++E I+R+ DQLRR++ E +
Sbjct: 853 EMIRISADLVEKMIDLAGENSINRSRVEMDVGQVGSILSDMELAIQRLADQLRRMEGELE 912
Query: 1386 GRILSRQQAEAERLGYEDFDPLEMDRHSQLQQLSRALSESASDLLDLKDTLERRNEDAHD 1445
+I+++ E R Y DFDPLEMD++S L QLS++L+ESASDLLD K TL + D
Sbjct: 913 SQIIAKHGTENSR--YSDFDPLEMDQYSSLNQLSKSLAESASDLLDFKTTLSEKIRDTEG 970
Query: 1446 LLQQQARINTELQEGLMRTRMVPFERMLPRLKRIVRQVAEELGKDVEFIVGNAEGEMDRN 1505
LL QQ+RI E+QE LMRTR+VPF R+LPRL+RI RQ + L + E +V N EGE+DRN
Sbjct: 971 LLLQQSRIQAEIQENLMRTRLVPFSRLLPRLQRIARQTSSALNRPAELVVQNTEGELDRN 1030
Query: 1506 VLERMAAPLEHMLRNAVDHGLESRDARLLAGKPEKGRITLDLTHEGGDIVFDMRDDGAGV 1565
+LER+ PLEHMLRNA+DHG+E+ + RL GKPE GRI L++ +G D++ DDG G+
Sbjct: 1031 ILERLVTPLEHMLRNAIDHGIETIEQRLKQGKPESGRIELNINRQGTDVIITFTDDGQGI 1090
Query: 1566 PLEAVRRKAIKRGLLDPNQDISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQ 1625
LE ++ KA++RGL+ Q + ++ Q I PG STA +ITQISGRGVG+DVV ++
Sbjct: 1091 NLEKLKNKALERGLIGAEQKLEAEELAQLIFHPGLSTAVEITQISGRGVGLDVVQSSIKA 1150
Query: 1626 LGGSMVIDSTPGEGVHFRIRLPFTVSVNRALMVQCADDQYAIPLNTIEGLVRVLPHELAG 1685
+GG + ++S G+G F IR+P TV+++ ALMV+ D QYA+PL IE +VR+ P L
Sbjct: 1151 MGGHVTVESVQGQGTTFTIRVPTTVAISDALMVKAGDQQYAVPLAQIERIVRISPSMLED 1210
Query: 1686 HYQQDPPRYEYAGQRYELFYLGDLLHTVSRPKLLGHYQPVPVLLVQ-CNERRVAIHVDAM 1744
++ + Y+L YL + + S P+L G +PVLL++ + + VA+ VD +
Sbjct: 1211 YFAGKEDTFRIDNMYYKLRYLSEFVANQSLPRLTGIVHSLPVLLIKGSSGQTVALLVDQL 1270
Query: 1745 AGTR-EIVVKGLGPQFAGVQGLSGATILGDGRVVLIIDLLAHIRARQPALPAQTADLPLI 1803
G+R +IVVK +G Q A V ++GATILGDG+V LI+D R Q +L +
Sbjct: 1271 VGSRAQIVVKPVGQQLASVGAVAGATILGDGQVCLILDGQYIARQVQSSLRVKEVKESRE 1330
Query: 1804 LNDPLKKRPLLVLVVDDSVTVRKVTSRLLERNGMNVLTAKDGIDALAVLEEHTPDLMLLD 1863
L+ +R L+++VDDSVTVRKVTSRLLER G +V+TAKDG++A+ LE PDLMLLD
Sbjct: 1331 LHRFNDER-RLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVEAIEQLESIKPDLMLLD 1389
Query: 1864 IEMPRMDGFEVATQVRNDPRLMRLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLL 1923
IEMPRMDGFEV VR+ +PIIMITSRTG+KHR+RA A+G Y+GKP+QE+ LL
Sbjct: 1390 IEMPRMDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMGKPFQEADLL 1449
Query: 1924 ESI 1926
+I
Sbjct: 1450 ANI 1452
Score = 104 bits (260), Expect = 8e-26
Identities = 145/647 (22%), Positives = 248/647 (38%), Gaps = 88/647 (13%)
Query: 588 LASPTSRLNPPALQRPGSLLPPPADE--------EPIDDELREVFLEETDEVLEVLHRNL 639
L SP + ++ LPP E + + E +FLEE++E L + L
Sbjct: 164 LCSPETVTGLELVEHTAETLPPLGVEKLEIHEEFDSLTAETLAIFLEESEEHLATIDEFL 223
Query: 640 PNSADKIAQGEMRRAFHTLKGSGRMVRALVLAELAWAVENLLNRVLERSVTLGPDVQQVL 699
N+ + RA HTL+GS M + + E + VENL +L+ + + +L
Sbjct: 224 NNNEQGSNYNALIRALHTLRGSSAMAQVEHIFEASSKVENLFKTMLQDELVSTSNETALL 283
Query: 700 DEAVALLPE----LIADFAIDDQRQ---------------RDEVD------ALAARAHAL 734
+ + L + I+ Q ++ VD L +R L
Sbjct: 284 THYAEFVRDYLYILKQECNIEQLEQVYQTFNHAWENYGFHQEPVDDLVNPQGLVSRLLEL 343
Query: 735 ASGMPVPAAEPHD-------PMLLEIFRNEAQSHLDSLNHFLHQAAEHVPLQVSDELQRA 787
+ A D P L++ +AQ ++ + Q L++ Q+
Sbjct: 344 EINQLLDAEFEFDQRVRTEYPEYLQLLVQQAQELVEHTRNRASQGVYDFTLELLQSYQQL 403
Query: 788 LHTLK----GSAYMAGVLPIAELARPLDHLTREYKAHRLPLDLDEVELLLEAEGLFQRGL 843
L + AY +L D L R+ L LL E Q+ +
Sbjct: 404 LAKPQLLNLDYAYELYTQAHQQLIYLFDTLA---AGQRVSLSPAHQSLLEELSAFVQQEI 460
Query: 844 RDLD--SDPLAPIKGAEDLINRTQSLLDHQLE-ALLDVRIKRDPQLIAN----------- 889
++ S P K D+ ++L+H L RI D L+ +
Sbjct: 461 EQVEELSTVTEPFKAPVDV-----AVLEHTFNLGELSARIAADKALMHSEHSNQVADADL 515
Query: 890 ---FLAQGMDILLDAENLLRRWQQHPGERQELTALLDELTTLGEGAHVADLHAIDALCEA 946
FL + ++L ++ L W + G+ L L+ L TL GA++ + +
Sbjct: 516 RDIFLEEAEELLAGMDSDLNSWTKESGQVTALNNLMRYLHTLKGGANMVQATHMGLIAHE 575
Query: 947 LLDLYGAVEESSLAVSERFFHEAEQAHEALISMLDQLAAGQEISPAPARVEALR------ 1000
L +Y + + VS + L + L Q PAPA +E L+
Sbjct: 576 LESIYQRIINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATIEILKNIESIS 635
Query: 1001 ----------ELLDEALDPSATGLIKSDGSRVLSVSELGAATQQLGHETERDDEIVEIFL 1050
++ +E L S+ + L+ +E+ +++L + + + E+FL
Sbjct: 636 TGVLVTTAEPKVAEEKLSESSQNIESDIADCTLADAEIAEHSEELQTDEQVRSIVEEVFL 695
Query: 1051 EEAVDILDSAGQSLKRWLLEPDNAAPLSSLQRDLHTLKGGARMAEIEAIGDLAHELECLY 1110
EEA ++L +A L +W+ E N + L LQR+ H+LKGGARMAE+E + +A+ LE +
Sbjct: 696 EEAEELLQTAHNLLDQWVEERSNRSLLLQLQRNAHSLKGGARMAELEPVAVIAYALENTF 755
Query: 1111 E--GLVDRRYSYTAELSHVLMASHERLALQLEELHHHQPLSDSAELI 1155
E GL + S L H + E A+ E+ + L S + I
Sbjct: 756 EQFGLHNLTTSVYDPLLHTALRWLEN-AIFKEQYENFDSLKHSLDSI 801
Score = 85.9 bits (211), Expect = 4e-20
Identities = 165/749 (22%), Positives = 293/749 (39%), Gaps = 132/749 (17%)
Query: 738 MPVPAAEPHDPMLLEIFRNEAQSHLDSLNHFLHQAAEHVPLQVS-DELQRALHTLKGSAY 796
+P + D +LEIF E + L+ + Q + Q ++R HTLKGS
Sbjct: 14 LPEDSYLDQDAEILEIFVEELEEIFTDLDVLIQQWIQQPEQQDKLTSIRRYFHTLKGSGR 73
Query: 797 MAGVLPIAELARPLDHLTR------------------------EYK-----AHRLPLDLD 827
M G ELA ++ L +YK + P +D
Sbjct: 74 MVGAKSSGELAWTVEDLLNRIIAKTQAFTPAISRYVELVFKIYKYKLFYNFQNSQPHAID 133
Query: 828 EVELLLEAEGLFQRGLRDLDSDPLAPIKG---AEDLINRTQSLLDHQLEALLDVRIKR-- 882
L+L + L Q+G + + L + + + + + L++H E L + +++
Sbjct: 134 LRPLVLIGQQLQQQGSLEPALEELLELSWTLCSPETVTGLE-LVEHTAETLPPLGVEKLE 192
Query: 883 --------DPQLIANFLAQGMDILLDAENLLRRWQQHPGERQELTALLDELTTLGEGAHV 934
+ +A FL + + L + L +Q AL+ L TL + +
Sbjct: 193 IHEEFDSLTAETLAIFLEESEEHLATIDEFLNNNEQ----GSNYNALIRALHTLRGSSAM 248
Query: 935 ADLHAIDALCEALLDLYGAVEESSLAVSER----FFHEAEQAHEAL--------ISMLDQ 982
A + I + +L+ + + L + H AE + L I L+Q
Sbjct: 249 AQVEHIFEASSKVENLFKTMLQDELVSTSNETALLTHYAEFVRDYLYILKQECNIEQLEQ 308
Query: 983 LAAGQEISPAPARVEALRELLDEALDPSATGLIKSDGSRVLSVSELGAATQQLGHETERD 1042
+ Q + A +E +D+ ++P GL+ SR+L + Q L E E D
Sbjct: 309 VY--QTFNHAWENYGFHQEPVDDLVNPQ--GLV----SRLLELE----INQLLDAEFEFD 356
Query: 1043 D-------EIVEIFLEEAVDILD------SAG---------QSLKRWLLEPD--NAAPLS 1078
E +++ +++A ++++ S G QS ++ L +P N
Sbjct: 357 QRVRTEYPEYLQLLVQQAQELVEHTRNRASQGVYDFTLELLQSYQQLLAKPQLLNLDYAY 416
Query: 1079 SLQRDLH--------TLKGGARMAEIEAIGDLAHELECLYEGLVDRRYSYTAELSHVLMA 1130
L H TL G R++ A L EL V + ELS V
Sbjct: 417 ELYTQAHQQLIYLFDTLAAGQRVSLSPAHQSLLEEL----SAFVQQEIEQVEELSTV--T 470
Query: 1131 SHERLALQLEELHHHQPLSDSAELIARVRALRQGSAPAAPAAAPPASGADPELLDIFLEE 1190
+ + + L H L + + IA +AL + AD +L DIFLEE
Sbjct: 471 EPFKAPVDVAVLEHTFNLGELSARIAADKALMH--------SEHSNQVADADLRDIFLEE 522
Query: 1191 AADILDSSSAALSRWQAEPGNRQEVETLLRDLHTLKGGARMVEIAPIGDLAHELEFLYEG 1250
A ++L + L+ W E G + L+R LHTLKGGA MV+ +G +AHELE +Y+
Sbjct: 523 AEELLAGMDSDLNSWTKESGQVTALNNLMRYLHTLKGGANMVQATHMGLIAHELESIYQR 582
Query: 1251 LSAGLLAPSPELFALLQGCHDRLAQMIDAVAD---GLPVGSVDKLIERIKTL----VHPS 1303
+ G + S L ++++ D LA+ I + + P + ++++ I+++ + +
Sbjct: 583 IINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATIEILKNIESISTGVLVTT 642
Query: 1304 DEPVTPVALPAGKAEAVVDPMADMVKISAELLDDLVNLAGETSIFRGRIEQQVNDARIAL 1363
EP + ++ + +AD AE+ + L + + R +E+ + L
Sbjct: 643 AEPKVAEEKLSESSQNIESDIADCTLADAEIAEHSEELQTDEQV-RSIVEE------VFL 695
Query: 1364 TEVETTIERMRDQLRRLDTETQGRILSRQ 1392
E E ++ + L + E R L Q
Sbjct: 696 EEAEELLQTAHNLLDQWVEERSNRSLLLQ 724
Score = 67.0 bits (162), Expect = 2e-14
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 44/279 (15%)
Query: 1028 LGAATQQLGHETERDDEIVEIFLEEAVDILDSAGQSLKRWLLEPDNAAPLSSLQRDLHTL 1087
+G T ++D EI+EIF+EE +I +++W+ +P+ L+S++R HTL
Sbjct: 9 IGTTTLPEDSYLDQDAEILEIFVEELEEIFTDLDVLIQQWIQQPEQQDKLTSIRRYFHTL 68
Query: 1088 KGGARMAEIEAIGDLAHELECLYEGLVDRRYSYTAELSHVL------------------- 1128
KG RM ++ G+LA +E L ++ + ++T +S +
Sbjct: 69 KGSGRMVGAKSSGELAWTVEDLLNRIIAKTQAFTPAISRYVELVFKIYKYKLFYNFQNSQ 128
Query: 1129 ---------------MASHERLALQLEELHHHQPLSDSAELIARVRALRQGSAPAAPAAA 1173
+ L LEEL S E + + + + P
Sbjct: 129 PHAIDLRPLVLIGQQLQQQGSLEPALEELLELSWTLCSPETVTGLELVEHTAETLPPLGV 188
Query: 1174 PPA------SGADPELLDIFLEEAADILDSSSAALSRWQAEPGNRQEVETLLRDLHTLKG 1227
E L IFLEE+ + L A + + L+R LHTL+G
Sbjct: 189 EKLEIHEEFDSLTAETLAIFLEESEEHL----ATIDEFLNNNEQGSNYNALIRALHTLRG 244
Query: 1228 GARMVEIAPIGDLAHELEFLYEGLSAGLLAPSPELFALL 1266
+ M ++ I + + ++E L++ + L + ALL
Sbjct: 245 SSAMAQVEHIFEASSKVENLFKTMLQDELVSTSNETALL 283