Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 16/268 (5%)

Query: 3   LRHIEIFQAIRQTGSVSAAAQLLHVSQPAVTKVLQHAELQLGFPLFLRVRGKLQPT---- 58
           L+ I  F  I + GS   AA+ LH+SQPA+++ ++  E  LG  L  R   ++  T    
Sbjct: 5   LQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVGR 64

Query: 59  ---PEALALESEVEKVTESLQGVRRLAKSLRRAPGQSVRIGAIPALALSLLPPAILEWKR 115
              P+A  L  + E   +S+  +R LA+   R  GQ V +  IP  A   LP  I ++  
Sbjct: 65  DFLPKARRLLDDFE---DSILSIRELAE---RQTGQ-VTLACIPTAAFYFLPSVIRDYNE 117

Query: 116 DYPEMACELSGDHSRELVQKLLMREIDLALTLNFSGHPGLTTQVLANGVLVALASKGYWS 175
            YP++   L    + + ++ +L  E D  + +    HP +    L     V    + +  
Sbjct: 118 QYPKIRIRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPL 177

Query: 176 DAELSQPLPLADLAGTALIGLSSADPLAAKLDSYLENVDPPPKVTISVQTYSLARAMVES 235
               S  +   +LA   LIG+         LD  L  ++  PK    VQ  S +  MVE+
Sbjct: 178 ANRAS--VTWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGMVEA 235

Query: 236 GAGLTVIDPFTALGASTATTCIRPLTPP 263
           G G++ +       A   T    PL  P
Sbjct: 236 GLGVSAMPSLAMPNADHPTLVSVPLIEP 263